作者：Parijat Pragya^b ; ¹ ; Gurjeet Kaur^a ; ¹ ; Syed Azmal Ali^a ; Shveta Bhatla^a ; Preeti Rawat^a ; Vaibhao Lule^b ; Sudarshan Kumar^a ; Ashok Kumar Mohanty^a ; ^{ashokmohanty1@gmail.com} ; Pradip Behare^b ; ^{pradip_behare@yahoo.com}

关键词：GIT ; Gastro Intestinal Tract ; KEGG ; Kyoto Encyclopedia of Genes and Genomes ; COGs ; Cluster of Orthologous Groups ; MRS ; de Man ; Rogosa and Sharpe ; NCDC ; National Collection of Dairy Cultures ; FDR ; False Discovery Rate ; PSM ; Peptide to Spectrum Match ; GOEAST ; Gene Ontology Enrichment Analysis Software Toolkit ; PEP ; Posterior Error Probability

刊名：Journal of Proteomics

出版年：2017

作者：Kiran Dashrath Rasal^a ; ^{kirancife@gmail.com} ; ^{Kiran.Rasal@icar.gov.in} ; Vemlawada Chakrapani^a ; Amrendra Kumar Pandey^a ; Avinash Rambhau Rasal^a ; Jitendra K. Sundaray^a ; Arun Ninawe^b ; Pallipuram Jayasankar^a

关键词：SNP ; single nucleotide polymorphism ; QTL ; quantitative trait loci ; NGS ; next generation sequencing ; ESTs ; expressed sequence tags ; GATK ; Genome Analysis Toolkit ; SSCP ; single strand conformation polymorphism ; GBS ; Genotyping-by-sequencing ; SIFT ; Sorting Intolerant from Tolerant ; nsSNPs ; non-synonymous single nucleotide polymorphisms ; AASs ; amino acid substitutions ; PROVEAN ; Protein Variation Effect Analyzer ; PDB ; Protein Data Bank

刊名：Gene Reports

出版年：2017

作者：Christopher Smowton^a ; ^{christopher.smowton@cruk.manchester.ac.uk" class="auth_mail" title="E-mail the corresponding author}Author Vitae ; Andoena Balla^b ; ^{andoena@cs.ucy.ac.cy" class="auth_mail" title="E-mail the corresponding author}Author Vitae ; Demetris Antoniades^b ; ^{danton@cs.ucy.ac.cy" class="auth_mail" title="E-mail the corresponding author}Author Vitae ; Crispin Miller^a ; ^{crispin.miller@cruk.manchester.ac.uk" class="auth_mail" title="E-mail the corresponding author}Author Vitae ; George Pallis^b ; ^{gpallis@cs.ucy.ac.cy" class="auth_mail" title="E-mail the corresponding author}Author Vitae ; Marios D. Dikaiakos^b ; ^{mdd@cs.ucy.ac.cy" class="auth_mail" title="E-mail the corresponding author}Author Vitae ; Wei Xing^a ; ^{Wei.Xing@manchester.ac.uk" class="auth_mail" title="E-mail the corresponding author} ; ^{wei.xing@cruk.manchester.ac.uk" class="auth_mail" title="E-mail the corresponding author}Author Vitae

关键词：Big data ; Clouds ; Performance

刊名：Future Generation Computer Systems

出版年：2017

作者：Benoit Witkowski ; PhD^a ; ^b ; ^c ; ^&dagger ; ; Valentine Duru ; MSc^a ; ^&dagger ; ; Nimol Khim ; PhD^a ; ^b ; ^c ; Leila S Ross ; PhD^j ; Benjamin Saintpierre ; MSc^d ; Johann Beghain ; MSc^d ; Sophy Chy ; BS^a ; Saorin Kim ; BS^a ; Sopheakvatey Ke ; BS^a ; Nimol Kloeung ; BS^a ; Rotha Eam ; BS^a ; Chanra Khean ; BS^a ; Malen Ken ; BS^a ; Kaknika Loch ; BS^a ; Anthony Bouillon ; PhD^b ; ^c ; ^f ; Anais Domergue ; MSc^a ; Laurence Ma ; MSc^e ; Christiane Bouchier ; PhD^e ; Rithea Leang ; PhD^h ; Rekol Huy ; MD^h ; Prof Gré ; gory Nuel ; PhDⁱ ; Jean-Christophe Barale ; PhD^b ; ^c ; ^f ; Eric Legrand ; PhD^b ; ^c ; ^d ; Pascal Ringwald ; MD^k ; Prof David A Fidock ; PhD^j ; Odile Mercereau-Puijalon ; PhD^d ; Fré ; dé ; ric Ariey ; PhD^d ; ^g ; Dr Didier Mé ; nard ; PhD^a ; ^b ; ^c ; ^{dmenard@pasteur-kh.org}

刊名：The Lancet Infectious Diseases

出版年：2017

作者：Francis Qué ; tier^a ; ^b ; ^{francis.quetier@gmail.com" class="auth_mail" title="E-mail the corresponding author}

关键词：Plant genomes editing ; Nuclear genome and organellar genomes ; Double homologous recombination ; Transgenesis ; Meganucleases ; TALENs ; CRISPR/Cas9 ; Social ethical and regulation policies

刊名：Plant Science

出版年：2016

作者：Maximilian Haeussler^a ; Jean-Paul Concordet^b ; ^{jean-paul.concordet@mnhn.fr" class="auth_mail" title="E-mail the corresponding author}

关键词：Genome editing ; CRISPR-Cas9 system ; Guide RNA

刊名：Journal of Genetics and Genomics

出版年：2016

作者：Ioannis Mougiakos¹ ; ³ ; Elleke F. Bosma¹ ; ³ ; Willem M. de Vos¹ ; Richard van Kranenburg¹ ; ² ; John van der Oost¹ ; ^{john.vanderoost@wur.nl" class="auth_mail" title="E-mail the corresponding author}

关键词：CRISPR-Cas ; bacteria ; archaea ; recombineering ; genome editing ; Cas9

刊名：Trends in Biotechnology

出版年：2016

作者：Locedie Mansueto^a ; Roven Rommel Fuentes^a ; Dmytro Chebotarov^a ; Frances Nikki Borja^a ; Jeffrey Detras^a ; Juan Miguel Abriol-Santos^a ; Kevin Palis^a ; ^b ; Alexandre Poliakov^c ; ^d ; Inna Dubchak^c ; ^d ; Victor Solovyev^e ; Ruaraidh Sackville Hamilton^a ; Kenneth L. McNally^a ; Nickolai Alexandrov^a ; Ramil Mauleon^a ; ^{r.mauleon@irri.org}

关键词：3k RG ; 3000 Rice Genomes ; API ; Application Programming Interface ; DAO ; Data Access Object ; HDF5 ; Hierarchical Data Format 5 (file format) ; HDRA ; High Density Rice Array ; indel ; insertion or deletion in genomic region ; IRGCIS ; International Rice Genebank Collection Information System (http ; //www.irgcis.irri.org ; 81/grc/irgcishome.html) ; IRRI ; International Rice Research Institute ; RDBMS ; Relational Database Management System ; SNP ; Single Nucleotide Polymorphism

刊名：Current Plant Biology

出版年：2016

作者：Christoph Endrullat ^{christoph.endrullat@th-wildau.de" class="auth_mail" title="E-mail the corresponding author} ; Jö ; rn Glö ; kler ^{gloekler@th-wildau.de" class="auth_mail" title="E-mail the corresponding author} ; Philipp Franke ^{pfranke@th-wildau.de" class="auth_mail" title="E-mail the corresponding author} ; Marcus Frohme ; ^{marcus.frohme@th-wildau.de" class="auth_mail" title="E-mail the corresponding author}

关键词：ABRF ; Association of Biomolecular Resource Facilities ; BAM ; binary alignment/map ; CAP ; College of American Pathologist's ; CEN ; European Committee for Standardization ; CLIA ; Clinical Laboratory Improvement Amendments ; ddPCR ; digital droplet PCR ; ERCC ; External RNA Controls Consortium ; FDA ; Food and Drug Administration ; FFPE ; formalin-fixed ; paraffin-embedded ; FMEA ; failure mode and effects analysis ; GATK ; genome analysis toolkit ; GSC ; Genomic Standards Consortium ; HGP ; Human Genome Project ; Indel

刊名：Applied & Translational Genomics

出版年：2016

作者：Dandan Zhang ; Zhenxiang Li ; Jian-Feng Li ; ^{lijfeng3@mail.sysu.edu.cn" class="auth_mail" title="E-mail the corresponding author}

关键词：CRISPR/Cas technology ; Genome editing ; Gene knockout ; Plants

刊名：Journal of Genetics and Genomics

出版年：2016