细小病毒分子生物学检测方法的研究进展
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摘要
细小病毒(parvovirus)属细小病毒科(parvoviridae)、细小病毒亚科(parvovirinae)、细小病毒属(protoparvovirus),是单链线状DNA病毒,病毒颗粒无囊膜。细小病毒自然感染宿主范围广,包括脊椎动物、无脊椎动物及人类。由细小病毒引起的细小病毒病正在全球范围内流行并严重威胁着人与动物的健康。现阶段实验室应用广泛的细小病毒分子生物学检测方法主要包括:实时荧光定量PCR检测、核酸探针检测、环介导等温扩增反应(loop-mediated isothermal amplification,LAMP)、重组酶聚合酶扩增反应(recombinase polymerase amplification,RPA)、DNA芯片技术等方法。本综述分别对不同细小病毒的分子生物学检测方法的研究进展进行阐述。
Parvovirus,with single-steanded DNA and nonenveloped are belong to the Parvoviridae,Parvovirinae and Protoparvovirus.The infection host rang of parvovirus is wide including vertebrates,invertebrates and humans.Parvovirus disease is spreading around the world and seriously threatening human and animal health.At present,the biological molecular detection method of parvovirus which has been wildly used in laboratories includes real-time fluorescence quantitative PCR,nucleic acid probe detection,ring-mediated isothermal amplification reaction(LAMP),recombinase polymerase amplification(RPA)reaction and DNA chip technology.In this paper,the research progress of molecular biological detection methods for different parvoviruses was reviewed.
Parvovirus,with single-steanded DNA and nonenveloped are belong to the Parvoviridae,Parvovirinae and Protoparvovirus.The infection host rang of parvovirus is wide including vertebrates,invertebrates and humans.Parvovirus disease is spreading around the world and seriously threatening human and animal health.At present,the biological molecular detection method of parvovirus which has been wildly used in laboratories includes real-time fluorescence quantitative PCR,nucleic acid probe detection,ring-mediated isothermal amplification reaction(LAMP),recombinase polymerase amplification(RPA)reaction and DNA chip technology.In this paper,the research progress of molecular biological detection methods for different parvoviruses was reviewed.
引文
[1]张莹,王秀荣,陈化兰.国际病毒分类委员会第十次病毒分类报告简介及分析[J].中国预防兽医学报,2018,41(1):1-7.
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[3]DESARIO C,DECARO N M,CAVALLI A,et al.Canine parvovirus infection:which diagnostic test for virus[J].J Virol Methods,2005,126(1):179-185.
[4]JIA J,ZHONG Y,GUO Y,et al.Simultaneous detection and differentiation of human parvovirus B19and human parvovirus 4by an internally controlled multiplex quantitative real-time PCR[J].Mol Cell Probes,2017,36(8):50-57.
[5]WANG J,WANG J,CUI Y,et al.Development of ataqman-based real-time PCR assay for the rapid and specific detection of novel duck-origin goose parvovirus[J].Mol Cell Probes,2017,34(7):56-58.
[6]KAUR G,CHANDRA M,DWIVEDI P N,et al.Multiplex real-time PCR for identification of canine parvovirus antigenic types[J].J Virol Methods,2016,233(2):1-5.
[7]王艳秋,张紫璇,高旭,等.鹅细小病毒TaqMan荧光定量PCR方法的建立及临床应用[J].中国兽医学报,2018,38(6):1100-1104.
[8]布日额,王君伟,吴金花,等.用地高辛标记核酸探针检测鹅细小病毒的研究[J].畜牧兽医学报,2004,35(1):102-105.
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[11]DECARO N,ELIA G,DESARIO C,et al.A minor groove binder probe real-time PCR assay for discrimination between type 2-based vaccines and field strains of canine parvovirus[J].J Virol Methods,2006,136(1):65-70.
[12]NOTOMI T,OKAYAMA H,MASUBUCHI H,et al.Loop-mediated isothermal amplification of DNA[J].Nucl Acid Res,2000,28(12):E63.
[13]陈珍容,陈进会,黄杰,等.犬细小病毒实时荧光环介导等温扩增检测方法的建立[J].中国兽医科学,2017(5):577-581.
[14]SUN Y L,YEN C H,TU C F.Immunocapture loopmediated isothermal amplification assays for the detection of canine parvovirus[J].J Virol Methods,2017,249(8):94-101.
[15]YANG J L,YANG R,CHENG A C,et al.A simple and rapid method for detection of goose parvovirus in the field by loop-mediated isothermal amplification[J].Virol J,2010,7(1):1-7.
[16]SUN Y L,YEN C H,TU C F.Visual detection of canine parvovirus based on loop-mediated isothermal amplification combined with enzyme-linked immunosorbent assay and with lateral flow dipstick[J].JVet Med Sci,2014,76(4):509-516.
[17]MUKHOPADHYAY H K,AMSAVENI S,MATTAS L,et al.Development and evaluation of loop-mediated isothermal amplification assay for rapid and sensitive detection of canine parvovirus DNA directly in faecal specimens[J].Lett Appl Microbiol,2012,55(3):202.
[18]LUO J G,GE J W,TANG L J,et al.Development of a loop-mediated isothermal amplification assay for rapid detection of bovine parvovirus[J].J Virol Methods,2013,191(2):155-161.
[19]JI J,XIE Q M,CHEN C Y,et al.Molecular detection of Muscovy duck parvovirus by loop-mediated isothermal amplification assay[J].Poult Sci,2010,89(3):477-483.
[20]PIEPENBURG O,WILLIAMS C H,STEMPLE D L,et al.DNA detection using recombination proteins[J].PLoS Biol,2006,4(7):e204.
[21]WANG J C,LIU L B,HAN Q A,et al.An exo probebased recombinase polymerase amplification assay for the rapid detection of porcine parvovirus[J].J Virol Methods,2017,248(6):145-147.
[22]WANG J,LIU L,LI R,et al.Rapid and sensitive detection of canine parvovirus type 2by recombinase polymerase amplification[J].J Vet Diagn Invest,2016,161(4):1015-1018.
[23]YANG Y,QIN X,ZHANG W,et al.Rapid and specific detection of porcine parvovirus by isothermal recombinase polymerase amplification assays[J].Mol Cell Probes,2016,30(5):300-305.
[24]符芳,杨玉菊,陈微晶,等.五种重要猪病病毒基因芯片探针的建立及其应用[J].中国兽医科学,2010,12(5):501-505.
[25]杨若松,姜金庆,张志,等.4种猪群常见病毒基因芯片检测方法的建立与应用[J].西北农林科技大学学报(自然科学版),2012,7(3):34-38.
[26]张学红.细小病毒B19与人博卡病毒的基因检测及基因特异性探针的初步研究[D].陕西西安:第四军医大学,2009:25-45.
[27]汪琳,赖平安,邢佑尚,等.基因芯片在犬病病原体检测中的应用[J].检验检疫学刊,2011,187(4):23-25.
[28]刘炯,冉志华,冯缨,等.基因芯片技术在细小病毒H-1诱导胃癌细胞基因表达研究中的应用价值[J].中华消化杂志,2004,24(5):285-288.
[2]KAILASAN S,AGBANDJEMCKENNA M,PAR-RISH C R.Parvovirus Family Conundrum:What Makes a Killer[J].Annual Rev Virol,2015,2(1):425-450.
[3]DESARIO C,DECARO N M,CAVALLI A,et al.Canine parvovirus infection:which diagnostic test for virus[J].J Virol Methods,2005,126(1):179-185.
[4]JIA J,ZHONG Y,GUO Y,et al.Simultaneous detection and differentiation of human parvovirus B19and human parvovirus 4by an internally controlled multiplex quantitative real-time PCR[J].Mol Cell Probes,2017,36(8):50-57.
[5]WANG J,WANG J,CUI Y,et al.Development of ataqman-based real-time PCR assay for the rapid and specific detection of novel duck-origin goose parvovirus[J].Mol Cell Probes,2017,34(7):56-58.
[6]KAUR G,CHANDRA M,DWIVEDI P N,et al.Multiplex real-time PCR for identification of canine parvovirus antigenic types[J].J Virol Methods,2016,233(2):1-5.
[7]王艳秋,张紫璇,高旭,等.鹅细小病毒TaqMan荧光定量PCR方法的建立及临床应用[J].中国兽医学报,2018,38(6):1100-1104.
[8]布日额,王君伟,吴金花,等.用地高辛标记核酸探针检测鹅细小病毒的研究[J].畜牧兽医学报,2004,35(1):102-105.
[9]AN D J,JEONG W,JEOUNG H Y,et al.Peptide nucleic acid-based(PNA)array for the antigenic discrimination of canine parvovirus[J].Res Vet Sci,2012,93(1):515-519.
[10]BONVICINI F,FILIPPONE C,MANARESI E,et al.Peptide nucleic acid-based in situ hybridization assay for detection of parvovirus B19nucleic acids[J].Clin Chem,2006,52(6):973-978.
[11]DECARO N,ELIA G,DESARIO C,et al.A minor groove binder probe real-time PCR assay for discrimination between type 2-based vaccines and field strains of canine parvovirus[J].J Virol Methods,2006,136(1):65-70.
[12]NOTOMI T,OKAYAMA H,MASUBUCHI H,et al.Loop-mediated isothermal amplification of DNA[J].Nucl Acid Res,2000,28(12):E63.
[13]陈珍容,陈进会,黄杰,等.犬细小病毒实时荧光环介导等温扩增检测方法的建立[J].中国兽医科学,2017(5):577-581.
[14]SUN Y L,YEN C H,TU C F.Immunocapture loopmediated isothermal amplification assays for the detection of canine parvovirus[J].J Virol Methods,2017,249(8):94-101.
[15]YANG J L,YANG R,CHENG A C,et al.A simple and rapid method for detection of goose parvovirus in the field by loop-mediated isothermal amplification[J].Virol J,2010,7(1):1-7.
[16]SUN Y L,YEN C H,TU C F.Visual detection of canine parvovirus based on loop-mediated isothermal amplification combined with enzyme-linked immunosorbent assay and with lateral flow dipstick[J].JVet Med Sci,2014,76(4):509-516.
[17]MUKHOPADHYAY H K,AMSAVENI S,MATTAS L,et al.Development and evaluation of loop-mediated isothermal amplification assay for rapid and sensitive detection of canine parvovirus DNA directly in faecal specimens[J].Lett Appl Microbiol,2012,55(3):202.
[18]LUO J G,GE J W,TANG L J,et al.Development of a loop-mediated isothermal amplification assay for rapid detection of bovine parvovirus[J].J Virol Methods,2013,191(2):155-161.
[19]JI J,XIE Q M,CHEN C Y,et al.Molecular detection of Muscovy duck parvovirus by loop-mediated isothermal amplification assay[J].Poult Sci,2010,89(3):477-483.
[20]PIEPENBURG O,WILLIAMS C H,STEMPLE D L,et al.DNA detection using recombination proteins[J].PLoS Biol,2006,4(7):e204.
[21]WANG J C,LIU L B,HAN Q A,et al.An exo probebased recombinase polymerase amplification assay for the rapid detection of porcine parvovirus[J].J Virol Methods,2017,248(6):145-147.
[22]WANG J,LIU L,LI R,et al.Rapid and sensitive detection of canine parvovirus type 2by recombinase polymerase amplification[J].J Vet Diagn Invest,2016,161(4):1015-1018.
[23]YANG Y,QIN X,ZHANG W,et al.Rapid and specific detection of porcine parvovirus by isothermal recombinase polymerase amplification assays[J].Mol Cell Probes,2016,30(5):300-305.
[24]符芳,杨玉菊,陈微晶,等.五种重要猪病病毒基因芯片探针的建立及其应用[J].中国兽医科学,2010,12(5):501-505.
[25]杨若松,姜金庆,张志,等.4种猪群常见病毒基因芯片检测方法的建立与应用[J].西北农林科技大学学报(自然科学版),2012,7(3):34-38.
[26]张学红.细小病毒B19与人博卡病毒的基因检测及基因特异性探针的初步研究[D].陕西西安:第四军医大学,2009:25-45.
[27]汪琳,赖平安,邢佑尚,等.基因芯片在犬病病原体检测中的应用[J].检验检疫学刊,2011,187(4):23-25.
[28]刘炯,冉志华,冯缨,等.基因芯片技术在细小病毒H-1诱导胃癌细胞基因表达研究中的应用价值[J].中华消化杂志,2004,24(5):285-288.
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