星星草（Puccinellia tenuiflora）叶绿体Na_2CO_3胁迫应答的生理学与定量蛋白质组学研究
|
摘要
盐碱胁迫是严重影响植物生长,限制产量和区域分布的重要因素之一。盐碱胁迫会引起植物水分缺失,破坏渗透平衡和氧化平衡,导致叶片气孔导度降低,抑制光合作用,对植物的光能利用和CO2同化作用造成影响。星星草(Puccinellia tenuiflora)作为一种耐盐碱的禾本科植物,能够在pH9-10的环境中完成生活史,是研究植物盐碱耐受机制的理想模式植物。
本研究以星星草叶绿体为材料,利用形态学、生理学与定量蛋白质组学研究策略对不同Na2CO3胁迫条件下(150mM-12h,200mM-12h,150mM-24h和200mM-24h)的胁迫应答机制进行了研究。我们发现,Na2C03胁迫一定程度破坏了叶绿体结构,抑制了光反应活性和CO2同化过程,限制了星星草的生长。Na+的大量积累对星星草产生了离子毒害,并且破坏了渗透平衡；而K+/Na+比值、Ca2+和Mg2+含量的降低抑制了多种酶的活性,对植物的生长产生影响。丙二醛和电解质外渗率的提高也证实星星草膜结构受到损伤,而脯氨酸和可溶性糖的大量积累有利于保护膜结构的完整性。抗氧化酶系统的变化提高了植株/叶绿体对氧化胁迫的防御能力。定量蛋白质组学结果揭示了叶绿体中68种Na2CO3应答蛋白质,它们主要参与捕光复合体、光系统Ⅱ、光合电子传递链和光系统Ⅰ的形成、能量代谢、卡尔文循环、光合色素代谢、基础代谢、胁迫防御、转录、蛋白质合成与命运,以及信号转导等过程。通过对这些结果的分析,我们推测星星草叶绿体可能通过以下几种策略应答Na2CO3胁迫：(1)通过降低叶绿素含量和抑制叶绿素a/b结合蛋白的表达减少过剩光能的吸收；(2)通过增加光化学淬灭和加速叶黄素循环提高热耗散能力,减少过量光能对光合结构的损伤；(3)通过提高超氧化物歧化酶(SOD)和抗坏血酸过氧化物酶(APX)等抗氧化酶的活性及加速叶绿素合成底物和中间产物的分解减轻氧化胁迫损伤,同时利用脯氨酸和可溶性糖的大量积累来缓解渗透胁迫,并清除活性氧类物质(ROS),维持氧化还原平衡。
总之,我们通过综合运用形态学、生理学和蛋白质组学研究手段,分析了星星草响应Na2CO3胁迫的光合应答机制,为深入研究植物耐盐碱机制提供了新的线索。
Alkali-salinity is one of the most significant abiotic stresses and it limits the productivity and geographical distribution of plants. Alkali-salinity stress imposed severe effects on plant by causing water deficit, which subsequently reduce the stomatal conductance, disturbances in osmotic and oxidative homeostasis. Photosynthesis is inhibited, such as the recuction of light energy utility and CO2assimilation in plants.
Puccinellia tenuiflora is a halophytic species belonging to the Gramineae, and capable of completing its life cycle under salt environment with pH9-10. Therefore, P. tenuiflora is considered as an ideal model plant for studying the salt-tolerant mechanisms in plants. In this study, the Na2CCO3responsive molecular mechanisms in P. tenuiflora chloroplast was investigated using a combined physiological and proteomic approach., we found the chloroplast structure was affected, and light reaction acitivity and CO2assimilation were inhibited Under various Na2CO3treatments (150mM-12h,200mM-12h,150mM-24h, and200mM-24h). These led to the growth of P. tenuiflora seedling reduced. Accumulation of Na+causes ion-specifis stress and dissipates the membrane potential. Altered K+/Na+ration and reduced Ca2+and Mg2+contents can inhibit the activity of many essential enzymes and metabolism pathways, which finally lead to growth inhibition. The remarkable increased result of malondialdehyde (MDA) and relative electrolyte leakage further illustrated the increase of membrane lipid peroxidation and membrane permeability. Moreover, the accumulation of proline and soluble sugar enhance the ability of osmotic regulation are helpful to preserve the integrity of cell structure. In addition, dynamic changes of antioxidant system play important roles in the protection of plant/chloroplast response to Na2CO3. Furthermore, using an isobaric tags for relative and absolute quantitation (iTRAQ) approach,68differentially expressed proteins were identified in P. tenuiflora chloroplast in response to Na2CO3. These proteins were mainly involved in the formation of light harvest complex, photosystem Ⅱ, photosynthetic electron transfer chain, and photosystem Ⅰ, energy metabolism, Calvin cycle, photosynthetic pigment metabolism, metabolism, stress and defence, transcription, protein synthesis and fate, as well as signaling transduction.
Taken together, our physiological and proteomics results reveal that P. tenuiflora chloroplast may utilize various strategies to cope with Na2CO3treatment. They include:(1) reduce excessive light energy absorption by decreasing chlorophyll content and inhibiting chlorophyll a/b binding protein expression;(2) enhance the heat dissipation by increasing photochemical quenching and accelerating xanthophyll cycle, and thereby reduce the damage of photosynthetic apparatus caused by excessive light energy;(3) minimize the oxidative injury by elevating the specific antioxidant system and enhancing the dissolution of xanthophyll synthetic substrates and intermediate products. In addition, the considerable accumulation of proline and soluble sugar can alleviate osmotic stress, as well as scavenge reactive oxygen species (ROS) to maintain oxidative balance.
This study lays a solid foundation for further research on salt-tolerant mechanisms in the Gramineae.
本研究以星星草叶绿体为材料,利用形态学、生理学与定量蛋白质组学研究策略对不同Na2CO3胁迫条件下(150mM-12h,200mM-12h,150mM-24h和200mM-24h)的胁迫应答机制进行了研究。我们发现,Na2C03胁迫一定程度破坏了叶绿体结构,抑制了光反应活性和CO2同化过程,限制了星星草的生长。Na+的大量积累对星星草产生了离子毒害,并且破坏了渗透平衡；而K+/Na+比值、Ca2+和Mg2+含量的降低抑制了多种酶的活性,对植物的生长产生影响。丙二醛和电解质外渗率的提高也证实星星草膜结构受到损伤,而脯氨酸和可溶性糖的大量积累有利于保护膜结构的完整性。抗氧化酶系统的变化提高了植株/叶绿体对氧化胁迫的防御能力。定量蛋白质组学结果揭示了叶绿体中68种Na2CO3应答蛋白质,它们主要参与捕光复合体、光系统Ⅱ、光合电子传递链和光系统Ⅰ的形成、能量代谢、卡尔文循环、光合色素代谢、基础代谢、胁迫防御、转录、蛋白质合成与命运,以及信号转导等过程。通过对这些结果的分析,我们推测星星草叶绿体可能通过以下几种策略应答Na2CO3胁迫：(1)通过降低叶绿素含量和抑制叶绿素a/b结合蛋白的表达减少过剩光能的吸收；(2)通过增加光化学淬灭和加速叶黄素循环提高热耗散能力,减少过量光能对光合结构的损伤；(3)通过提高超氧化物歧化酶(SOD)和抗坏血酸过氧化物酶(APX)等抗氧化酶的活性及加速叶绿素合成底物和中间产物的分解减轻氧化胁迫损伤,同时利用脯氨酸和可溶性糖的大量积累来缓解渗透胁迫,并清除活性氧类物质(ROS),维持氧化还原平衡。
总之,我们通过综合运用形态学、生理学和蛋白质组学研究手段,分析了星星草响应Na2CO3胁迫的光合应答机制,为深入研究植物耐盐碱机制提供了新的线索。
Alkali-salinity is one of the most significant abiotic stresses and it limits the productivity and geographical distribution of plants. Alkali-salinity stress imposed severe effects on plant by causing water deficit, which subsequently reduce the stomatal conductance, disturbances in osmotic and oxidative homeostasis. Photosynthesis is inhibited, such as the recuction of light energy utility and CO2assimilation in plants.
Puccinellia tenuiflora is a halophytic species belonging to the Gramineae, and capable of completing its life cycle under salt environment with pH9-10. Therefore, P. tenuiflora is considered as an ideal model plant for studying the salt-tolerant mechanisms in plants. In this study, the Na2CCO3responsive molecular mechanisms in P. tenuiflora chloroplast was investigated using a combined physiological and proteomic approach., we found the chloroplast structure was affected, and light reaction acitivity and CO2assimilation were inhibited Under various Na2CO3treatments (150mM-12h,200mM-12h,150mM-24h, and200mM-24h). These led to the growth of P. tenuiflora seedling reduced. Accumulation of Na+causes ion-specifis stress and dissipates the membrane potential. Altered K+/Na+ration and reduced Ca2+and Mg2+contents can inhibit the activity of many essential enzymes and metabolism pathways, which finally lead to growth inhibition. The remarkable increased result of malondialdehyde (MDA) and relative electrolyte leakage further illustrated the increase of membrane lipid peroxidation and membrane permeability. Moreover, the accumulation of proline and soluble sugar enhance the ability of osmotic regulation are helpful to preserve the integrity of cell structure. In addition, dynamic changes of antioxidant system play important roles in the protection of plant/chloroplast response to Na2CO3. Furthermore, using an isobaric tags for relative and absolute quantitation (iTRAQ) approach,68differentially expressed proteins were identified in P. tenuiflora chloroplast in response to Na2CO3. These proteins were mainly involved in the formation of light harvest complex, photosystem Ⅱ, photosynthetic electron transfer chain, and photosystem Ⅰ, energy metabolism, Calvin cycle, photosynthetic pigment metabolism, metabolism, stress and defence, transcription, protein synthesis and fate, as well as signaling transduction.
Taken together, our physiological and proteomics results reveal that P. tenuiflora chloroplast may utilize various strategies to cope with Na2CO3treatment. They include:(1) reduce excessive light energy absorption by decreasing chlorophyll content and inhibiting chlorophyll a/b binding protein expression;(2) enhance the heat dissipation by increasing photochemical quenching and accelerating xanthophyll cycle, and thereby reduce the damage of photosynthetic apparatus caused by excessive light energy;(3) minimize the oxidative injury by elevating the specific antioxidant system and enhancing the dissolution of xanthophyll synthetic substrates and intermediate products. In addition, the considerable accumulation of proline and soluble sugar can alleviate osmotic stress, as well as scavenge reactive oxygen species (ROS) to maintain oxidative balance.
This study lays a solid foundation for further research on salt-tolerant mechanisms in the Gramineae.
引文
[1]Munns R. Comparative physiology of salt and water stress. Plant Cell Environ,2002,25(2):239-250.
[2]Chinnusamy V., Zhu J., Zhu J. K. Salt stress signaling and mechanisms of plant salt tolerance. Genet Eng (N Y),2006,27:141-177.
[3]Mahajan S., Tuteja N. Cold, salinity and drought stresses:an overview. Arch Biochem Biophys,2005,444(2): 139-158.
[4]Tuteja N. Mechanisms of high salinity tolerance in plants. Methods Enzymol,2007,428:419-438.
[5]Parida A. K., Das A. B. Salt tolerance and salinity effects on plants:a review. Ecotoxicol Environ Saf,2005, 60(3):324-349.
[6]Walia H., Wilson C., Condamine P., Liu X., Ismail A. M., Zeng L., Wanamaker S. I., Mandal J., Xu J., Cui X., Close T. J. Comparative transcriptional profiling of two contrasting rice genotypes under salinity stress during the vegetative growth stage. Plant Physiol,2005,139(2):822-835.
[7]Kawasaki S., Borchert C., Deyholos M., Wang H., Brazille S., Kawai K., Galbraith D., Bohnert H. J. Gene expression profiles during the initial phase of salt stress in rice. Plant Cell,2001,13(4):889-905.
[8]Chao D. Y., Luo Y. H., Shi M., Luo D., Lin H. X. Salt-responsive genes in rice revealed by cDNA microarray analysis. Cell Res,2005,15(10):796-810.
[9]Gu R., Fonseca S., Puskas L. G., Hackler L., Jr., Zvara A., Dudits D., Pais M. S. Transcript identification and profiling during salt stress and recovery of Populus euphratica. Tree Physiol,2004,24(3):265-276.
[10]Jiang Y., Deyholos M. K. Comprehensive transcriptional profiling of NaCl-stressed Arabidopsis roots reveals novel classes of responsive genes. BMC Plant Biol,2006,6:25.
[11]Wang Z.L., Li P.H., Fredricksen M., Gong Z.Z., Kim C. S., Zhang C., Bohnert H. J., Zhu J.K., Bressan R. A., Hasegawa P. M., Zhao Y.X., Zhang H. Expressed sequence tags from Thellungiella halophila, a new model to study plant salt-tolerance. Plant science,2004,166(3):609-616.
[12]Taji T., Seki M., Satou M., Sakurai T., Kobayashi M., Ishiyama K., Narusaka Y., Narusaka M., Zhu J. K., Shinozaki K. Comparative genomics in salt tolerance between Arabidopsis and arabidopsis-related halophyte salt cress using Arabidopsis microarray. Plant Physiol,2004,135(3):1697-1709.
[13]Wang Y., Chu Y., Liu G., Wang M. H., Jiang J., Hou Y., Qu G., Yang C. Identification of expressed sequence tags in an alkali grass (Puccinellia tenuiflora) cDNA library. J Plant Physiol,2007,164(1):78-89.
[14]Kore-eda S., Cushman M. A., Akselrod I., Bufford D., Fredrickson M., Clark E., Cushman J. C. Transcript profiling of salinity stress responses by large-scale expressed sequence tag analysis in Mesembryanthemum crystallinum. Gene,2004,341:83-92.
[15]Munns R. Genes and salt tolerance:bringing them together. New Phytol,2005,167(3):645-663.
[16]Flowers T. J., Colmer T. D. Salinity tolerance in halophytes. New Phytol,2008,179(4):945-963.
[17]Horie T., Yoshida K., Nakayama H., Yamada K., Oiki S., Shinmyo A. Two types of HKT transporters with different properties of Na+ and K+ transport in Oryza sativa. Plant J,2001,27(2):129-138.
[18]Gaxiola R. A., Rao R., Sherman A., Grisafi P., Alper S. L., Fink G. R. The Arabidopsis thaliana proton transporters, AtNhx 1 and Avpl, can function in cation detoxification in yeast. Proc Natl Acad Sci U S A, 1999,96(4):1480-1485.
[19]Apse M. P., Aharon G. S., Snedden W. A., Blumwald E. Salt tolerance conferred by overexpression of a vacuolar Na+/H+ antiport in Arabidopsis. Science,1999,285(5431):1256-1258.
[20]Verbruggen N., Villarroel R., Van Montagu M. Osmoregulation of a pyrroline-5-carboxylate reductase gene in Arabidopsis thaliana. Plant Physiol,1993,103(3):771-781.
[21]Miller G., Suzuki N., Ciftci-Yilmaz S., Mittler R. Reactive oxygen species homeostasis and signalling during drought and salinity stresses. Plant Cell Environ,2010,33(4):453-467.
[22]Zhu J. K. Salt and drought stress signal transduction in plants. Annu Rev Plant Biol,2002,53:247-273.
[23]Hu H., Dai M., Yao J., Xiao B., Li X., Zhang Q., Xiong L. Overexpressing a NAM, ATAF, and CUC (NAC) transcription factor enhances drought resistance and salt tolerance in rice. Proc Natl Acad Sci U S A, 2006,103(35):12987-12992.
[24]Chen S., Harmon A. C. Advances in plant proteomics. Proteomics,2006,6(20):5504-5516.
[25]Pang Q., Chen S., Dai S., Chen Y., Wang Y., Yan X. Comparative proteomics of salt tolerance in Arabidopsis thaliana and Thellungiella halophila. J Proteome Res,2010,9(5):2584-2599.
[26]Ndimba B. K., Chivasa S., Simon W. J., Slabas A. R. Identification of Arabidopsis salt and osmotic stress responsive proteins using two-dimensional difference gel electrophoresis and mass spectrometry. Proteomics,2005,5(16):4185-4196.
[27]Lee S., Lee E. J., Yang E. J., Lee J. E., Park A. R., Song W. H., Park O. K. Proteomic identification of annexins, calcium-dependent membrane binding proteins that mediate osmotic stress and abscisic acid signal transduction in Arabidopsis. Plant Cell,2004,16(6):1378-1391.
[28]Kim Y. O., Pan S., Jung C. H., Kang H. A zinc finger-containing glycine-rich RNA-binding protein, a/RZ-la, has a negative impact on seed germination and seedling growth of Arabidopsis thaliana under salt or drought stress conditions. Plant Cell Physiol,2007,48(8):1170-1181.
[29]Jiang Y., Yang B., Harris N. S., Deyholos M. K. Comparative proteomic analysis of NaCl stress-responsive proteins in Arabidopsis roots. J Exp Bot,2007,58(13):3591-3607.
[30]Zhang L., Tian L. H., Zhao J. F., Song Y., Zhang C. J., Guo Y. Identification of an apoplastic protein involved in the initial phase of salt stress response in rice root by two-dimensional electrophoresis. Plant Physiol, 2009,149(2):916-928.
[31]Yan S., Tang Z., Su W., Sun W. Proteomic analysis of salt stress-responsive proteins in rice root. Proteomics, 2005,5(1):235-244.
[32]Wen F.P., Zhang Z.H., Bai T., Xu Q., Pan Y.H. Proteomics reveals the effects of gibberellic acid (GA3) on salt-stressed rice (Oryza sativa L.) shoots. Plant science,2010,178(2):170-175.
[33]Salehdeh G. H., Siopomgcp J., Wade L. J., Ghareyazie B., Bennett J. A proteomic approach to analyzing drought-and salt-responsiveness in rice. Field Crops Research,2002,76:21.
[34]Ruan S. L., Ma H. S., Wang S. H., Fu Y. P., Xin Y., Liu W. Z., Wang F., Tong J. X., Wang S. Z., Chen H. Z. Proteomic identification of OsCYP2, a rice cyclophilin that confers salt tolerance in rice(Oiyza sativa L.) seedlings when overexpressed. BMC Plant Biol,2011,11:34.
[35]Parker R., Flowers T. J., Moore A. L., Harpham N. V. An accurate and reproducible method for proteome profiling of the effects of salt stress in the rice leaf lamina. J Exp Bot,2006,57(5):1109-1118.
[36]Nohzadeh Malakshah S., Habibi Rezaei M., Heidari M., Salekdeh G. H. Proteomics reveals new salt responsive proteins associated with rice plasma membrane. Biosci Biotechnol Biochem,2007,71(9): 2144-2154.
[37]Li X. J., Yang M. F., Chen H., Qu L. Q., Chen F., Shen S. H. Abscisic acid pretreatment enhances salt tolerance of rice seedlings:Proteomic evidence. Biochim Biophys Acta,2010.
[38]Kim D. W., Rakwal R., Agrawal G. K., Jung Y. H., Shibato J., Jwa N. S., Iwahashi Y., Iwahashi H., Kim D. H., Shim Ie S., Usui K. A hydroponic rice seedling culture model system for investigating proteome of salt stress in rice leaf. Electrophoresis,2005,26(23):4521-4539.
[39]Dooki A. D., Mayer-Posner F. J., Askari H., Zaiee A. A., Salekdeh G. H. Proteomic responses of rice young panicles to salinity. Proteomics,2006,6(24):6498-6507.
[40]Chitteti B. R., Peng Z. Proteome and phosphoproteome differential expression under salinity stress in rice (Oryza saliva) roots. J Proteome Res,2007,6(5):1718-1727.
[41]Cheng Y, Qi Y., Zhu Q., Chen X, Wang N., Zhao X., Chen H., Cui X., Xu L., Zhang W. New changes in the plasma-membrane-associated proteome of rice roots under salt stress. Proteomics,2009,9(11): 3100-3114.
[42]Abbasi F. M., Komatsu S. A proteomic approach to analyze salt-responsive proteins in rice leaf sheath. Proteomics,2004,4(7):2072-2081.
[43]Wang M. C, Peng Z. Y., Li C. L., Li F., Liu C, Xia G. M. Proteomic analysis on a high salt tolerance introgression strain of Triticum aestivun/Thinopyrum ponticum. Proteomics,2008,8(7):1470-1489.
[44]Peng Z., Wang M., Li F., Lv H., Li C., Xia G. A proteomic study of the response to salinity and drought stress in an introgression strain of bread wheat. Mol Cell Proteomics,2009,8(12):2676-2686.
[45]Jacoby R. P., Millar A. H., Taylor N. L. Wheat mitochondrial proteomes provide new links between antioxidant defense and plant salinity tolerance. J Proteome Res,2010,9(12):6595-6604.
[46]Huo C. M., Zhao B. C., Ge R. C., Shen Y. Z., Huang Z. J. Proteomic analysis of the salt tolerance mutant of wheat under salt stress. Yi Chuan Xue Bao,2004,31(12):1408-1414.
[47]Caruso G., Cavaliere C., Guarino C., Gubbiotti R., Foglia P., Lagana A. Identification of changes in Triticum durum L. leaf proteome in response to salt stress by two-dimensional electrophoresis and MALDI-TOF mass spectrometry. Anal Bioanal Chem,2008,391(1):381-390.
[48]Witzel K., Weidner A., Surabhi G. K., Varshney R. K., Kunze G., Buck-Sorlin G. H., Bomer A., Mock H. P. Comparative analysis of the grain proteome fraction in barley genotypes with contrasting salinity tolerance during germination. Plant Cell Environ,2010,33(2):211-222.
[49]Witzel K., Weidner A., Surabhi G. K., Borner A., Mock H. P. Salt stress-induced alterations in the root proteome of barley genotypes with contrasting response towards salinity. J Exp Bot,2009,60(12): 3545-3557.
[50]Sugimoto M., Takeda K. Proteomic analysis of specific proteins in the root of salt-tolerant barley. Biosci Biotechnol Biochem,2009,73(12):2762-2765.
[51]Rasoulnia A., Bihamta M. R., Peyghambari S. A., Alizadeh H., Rahnama A. Proteomic response of barley leaves to salinity. Mol Biol Rep,2011,38(8):5055-5063.
[52]Zorb C., Schmitt S., Neeb A., Karl S., Linder M., Schubert S. The biochemical reaction of maize (Zea mays L.) to salt stress is characterized by a mitigation of symptoms and not by a specific adaptation. Plant science, 2004,167(1):91-100.
[53]Zorb C., Schmitt S., Muhling K. H. Proteomic changes in maize roots after short-term adjustment to saline growth conditions. Proteomics,2010,10(24):4441-4449.
[54]Zorb C., Herbst R., Forreiter C., Schubert S. Short-term effects of salt exposure on the maize chloroplast protein pattern. Proteomics,2009,9(17):4209-4220.
[55]Veeranagamallaiah G., Jyothsnakumari G., Thippeswamy M., Chandra Obul Reddy P., Surabhi G.-K., Sriranganayakulu G., Mahesh Y., Rajasekhar B., Madhurarekha C., Sudhakar C. Proteomic analysis of salt stress responses in foxtail millet (Setaria italica L. cv. Prasad) seedling. Plant science,2008,175(5): 631-641.
[56]Kumar Swami A., Alam S. I., Sengupta N., Sarin R. Differential proteomic analysis of salt stress response in Sorghum bicolor leaves. Environmental and Experimental Botany,2011,71(2):321-328.
[57]Xu C., Sibicky T., Huang B. Protein profile analysis of salt-responsive proteins in leaves and roots in two cultivars of creeping bentgrass differing in salinity tolerance. Plant Cell Rep,2010,29(6):595-615.
[58]Bandehagh A., Salekdeh G. H., Toorchi M., Mohammadi A., Komatsu S. Comparative proteomic analysis of canola leaves under salinity stress. Proteomics,2011,11(10):1965-1975.
[59]Jain S., Srivastava S., Sarin N. B., Kav N. N. Proteomics reveals elevated levels of PR 10 proteins in saline-tolerant peanut (Arachis hypogaea) calli. Plant Physiol Biochem,2006,44(4):253-259.
[60]Sobhanian H., Razavizadeh R., Nanjo Y., Ehsanpour A. A., Jazii F. R., Motamed N., Komatsu S. Proteome analysis of soybean leaves, hypocotyls and roots under salt stress. Proteome Sci,2010,8:19.
[61]Aghaei K., Ehsanpour A. A., Shah A. H., Komatsu S. Proteome analysis of soybean hypocotyl and root under salt stress. Amino Acids,2009,36(1):91-98.
[62]Nat N. V. K., Sanjeeva S., Laksiri G., Stanford F. B. Proteome-level changes in the roots of Pisum sativum in response to salinity. Annals of Applied Biology,2004,145(2):217-230.
[63]Keeler M., Letarte J., Hattrup E., Hickman F., Haynes P. A. Two-dimensional differential in-gel electrophoresis (DIGE) of leaf and roots of Lycopersicon esculentum. Methods Mol Biol,2007,355: 157-174.
[64]Manaa A., Ben Ahmed H., Vaiot B., Bouchet J. P., Aschi-Smiti S., Causse M., Faurobert M. Salt and genotype impact on plant physiology and root proteome variations in tomato. J Exp Bot,2011,62(8): 2797-2813.
[65]Chen S., Gollop N., Heuer B. Proteomic analysis of salt-stressed tomato (Solanum lycopersicum) seedlings: effect of genotype and exogenous application of glycinebetaine. J Exp Bot,2009,60(7):2005-2019.
[66]Aghaei K., Ehsanpour A. A., Komatsu S. Proteome analysis of potato under salt stress. J Proteome Res,2008, 7(11):4858-4868.
[67]Vincent D., Ergul A., Bohlman M. C., Tattersall E. A., Tillett R. L., Wheatley M. D., Woolsey R., Quilici D. R., Joets J., Schlauch K., Schooley D. A., Cushman J. C., Cramer G. R. Proteomic analysis reveals differences between Vitis vinifera L. cv. Chardonnay and cv. Cabernet Sauvignon and their responses to water deficit and salinity. J Exp Bot,2007,58(7):1873-1892.
[68]Jellouli N., Ben Jouira H., Skouri H., Ghorbel A., Gourgouri A., Mliki A. Proteomic analysis of Tunisian grapevine cultivar Razegui under salt stress. J Plant Physiol,2008,165(5):471-481.
[69]Razavizadeh R., Ehsanpour A. A., Ahsan N., Komatsu S. Proteome analysis of tobacco leaves under salt stress. Peptides,2009,30(9):1651-1659.
[70]Dani V., Simon W. J., Duranti M., Croy R. R. Changes in the tobacco leaf apoplast proteome in response to salt stress. Proteomics,2005,5(3):737-745.
[71]Du C. X., Fan H. F., Guo S. R., Tezuka T., Li J. Proteomic analysis of cucumber seedling roots subjected to salt stress. Phytochemistry,2010,71(13):1450-1459.
[72]Wakeel A., Asif A. R., Pitann B., Schubert S. Proteome analysis of sugar beet (Beta vulgaris L.) elucidates constitutive adaptation during the first phase of salt stress. J Plant Physiol,2011,168(6):519-526.
[73]Tanou G., Job C, Rajjou L., Arc E., Belghazi M., Diamantidis G., Molassiotis A., Job D. Proteomics reveals the overlapping roles of hydrogen peroxide and nitric oxide in the acclimation of citrus plants to salinity. Plant J,2009,60(5):795-804.
[74]Chattopadhyay A., Subba P., Pandey A., Bhushan D., Kumar R., Datta A., Chakraborty S., Chakraborty N. Analysis of the grasspea proteome and identification of stress-responsive proteins upon exposure to high salinity, low temperature, and abscisic acid treatment. Phytochemistry,2011,72(10):1293-1307.
[75]Tada Y., Kashimura T. Proteomic analysis of salt-responsive proteins in the mangrove plant, Bruguiera gymnorhiza. Plant Cell Physiol,2009,50(3):439-446.
[76]Chen F., Zhang S., Jiang H., Ma W., Korpelainen H., Li C. Comparative proteomics analysis of salt response reveals sex-related photosynthetic inhibition by salinity in Populns cathayana cuttings. J Proteome Res, 2011,10(9):3944-3958.
[77]Geissler N., Hussin S., Koyro H. W. Elevated atmospheric CO2 concentration enhances salinity tolerance in Aster tripolium L. Planta,2010,231(3):583-594.
[78]Barkla B. J., Vera-Estrella R., Hernandez-Coronado M., Pantoja O. Quantitative proteomics of the tonoplast reveals a role for glycolytic enzymes in salt tolerance. Plant Cell,2009,21(12):4044-4058.
[79]Sobhanian H., Motamed N., Jazii F. R., Nakamura T., Komatsu S. Salt stress induced differential proteome and metabolome response in the shoots of Aeluropus lagopoides (Poaceae), a halophyte C4 plant. J Proteome Res,2010,9(6):2882-2897.
[80]Askari H., Edqvist J., Hajheidari M., Kafi M., Salekdeh G. H. Effects of salinity levels on proteome of Suaeda aegyptiaca leaves. Proteomics,2006,6(8):2542-2554.
[81]Li W., Zhang C., Lu Q., Wen X., Lu C. The combined effect of salt stress and heat shock on proteome profiting in Suaeda salsa. J Plant Physiol,2011,168(15):1743-1752.
[82]Yu J., Chen S., Zhao Q., Wang T., Yang C., Diaz C., Sun G., Dai S. Physiological and proteomic analysis of salinity tolerance in Puccinellia tenuiflora. J Proteome Res,2011,10(9):3852-3870.
[83]Wang X., Li X., Deng X., Han H., Shi W., Li Y. A protein extraction method compatible with proteomic analysis for the euhalophyte Salicornia europaea. Electrophoresis,2007,28(21):3976-3987.
[84]Wang X., Fan P., Song H., Chen X., Li X., Li Y. Comparative proteomic analysis of differentially expressed proteins in shoots of Salicornia europaea under different salinity. J Proteome Res,2009,8(7): 3331-3345.
[85]Fan P., Feng J., Jiang P., Chen X., Bao H., Nie L., Jiang D., Lv S., Kuang T., Li Y. Coordination of carbon fixation and nitrogen metabolism in Salicornia europaea under salinity:Comparative proteomic analysis on chloroplast proteins. Proteomics,2011,11(22):4346-4367.
[86]Sengupta S., Majumder A. L. Insight into the salt tolerance factors of a wild halophytic rice, Porteresia coarctata:a physiological and proteomic approach. Planta,2009,229(4):911-929.
[87]Wang X., Yang P., Gao Q., Liu X., Kuang T., Shen S., He Y. Proteomic analysis of the response to high-salinity stress in Physcomitrellapatens. Planta,2008,228(1):167-177.
[88]Liska A. J., Shevchenko A., Pick U., Katz A. Enhanced photosynthesis and redox energy production contribute to salinity tolerance in Dunaliella as revealed by homology-based proteomics. Plant Physiol, 2004,136(1):2806-2817.
[89]Katz A., Waridel P., Shevchenko A., Pick U. Salt-induced changes in the plasma membrane proteome of the halotolerant alga Dunaliella salina as revealed by blue native gel electrophoresis and nano-LC-MS/MS analysis. Mol Cell Proteomics,2007,6(9):1459-1472.
[90]Zhang H., Han B., Wang T., Chen S., Li H., Zhang Y., Dai S. Mechanisms of plant salt response:insights from proteomics. J Proteome Res,2012,11(1):49-67.
[91]Enami I., Tohri A., Kamo M., Ohta H., Shen J.-R. Identification of domains on the 43 kDa chlorophyll-carrying protein (CP43) that are shielded from tryptic attack by binding of the extrinsic 33 kDa protein with Photosystem Ⅱ complex. Biochimica et Biophysica Acta (BBA)-Bioenergetics,1997, 1320(1):17-26.
[92]Sirpio S., Allahverdiyeva Y., Suorsa M., Paakkarinen V., Vainonen J., Battchikova N., Aro E. M. TLP18.3, a novel thylakoid lumen protein regulating photosystem Ⅱ repair cycle. Biochem J,2007,406(3):415-425.
[93]Hippler M., Ratajczak R., Haehnel W. Identification of the plastocyanin binding subunit of photosystem 1. FEBS Letters,1989,250(2):280-284.
[94]Rodoni S., Vicentini F., Schellenberg M., Matile P., Hortensteiner S. Partial purification and characterization of red chlorophyll catabolite reductase, a stroma protein involved in chlorophyll breakdown. Plant Physiol,1997,115(2):677-682.
[95]Takamiya K. I., Tsuchiya T., Ohta H. Degradation pathway(s) of chlorophyll:what has gene cloning revealed? Trends Plant Sci,2000,5(10):426-431.
[96]Pruzinska A., Anders I., Aubry S., Schenk N., Tapernoux-Luthi E., Muller T., Krautler B., Hortensteiner S. In vivo participation of red chlorophyll catabolite reductase in chlorophyll breakdown. Plant Cell,2007, 19(1):369-387.
[97]Mittler R., Vanderauwera S., Gollery M., Van Breusegem F. Reactive oxygen gene network of plants. Trends Plant Sci,2004,9(10):490-498.
[98]Jithesh M. N., Prashanth S. R., Sivaprakash K. R., Parida A. K. Antioxidative response mechanisms in halophytes:their role in stress defence. J Genet,2006,85(3):237-254.
[99]Zhang H. X., Hodson J. N., Williams J. P., Blumwald E. Engineering salt-tolerant Brassica plants: characterization of yield and seed oil quality in transgenic plants with increased vacuolar sodium accumulation. Proc Natl Acad Sci U S A,2001,98(22):12832-12836.
[100]Gould S. J., Valle D. Peroxisome biogenesis disorders:genetics and cell biology. Trends Genet,2000,16(8): 340-345.
[101]Nito K., Kamigaki A., Kondo M., Hayashi M., Nishimura M. Functional classification of Arabidopsis peroxisome biogenesis factors proposed from analyses of knockdown mutants. Plant Cell Physiol,2007, 48(6):763-774.
[102]Horling F., Lamkemeyer P., Konig J., Finkemeier I., Kandlbinder A., Baier M., Dietz K. J. Divergent light-, ascorbate-, and oxidative stress-dependent regulation of expression of the peroxiredoxin gene family in Arabidopsis. Plant Physiol,2003,131(1):317-325.
[103]Dietz K. J. Peroxiredoxins in plants and cyanobacteria. Antioxid Redox Signal,2011,15(4):1129-1159.
[104]Yoshimura K.., Miyao K., Gaber A., Takeda T., Kanaboshi H., Miyasaka H., Shigeoka S. Enhancement of stress tolerance in transgenic tobacco plants overexpressing Chlamydomonas glutathione peroxidase in chloroplasts or cytosol. Plant J,2004,37(1):21-33.
[105]Dixon D. P., Lapthorn A., Edwards R. Plant glutathione transferases. Genome Biol,2002,3(3): REVIEWS3004.
[106]Lane B. G., Dunwell J. M., Ray J. A., Schmitt M. R., Cuming A. C. Germin, a protein marker of early plant development, is an oxalate oxidase. J Biol Chem,1993,268(17):12239-12242.
[107]Woo E. J., Dunwell J. M., Goodenough P. W., Marvier A. C., Pickersgill R. W. Germin is a manganese containing homohexamer with oxalate oxidase and superoxide dismutase activities. Nat Struct Biol,2000, 7(11):1036-1040.
[108]Cao Y. R., Chen S. Y., Zhang J. S. Ethylene signaling regulates salt stress response:An overview. Plant Signal Behav,2008,3(10):761-763.
[109]Darwish E., Testerink C., Khalil M., El-Shihy O., Munnik T. Phospholipid signaling responses in salt-stressed rice leaves. Plant Cell Physiol,2009,50(5):986-997.
[110]Mahajan S., Pandey G. K., Tuteja N. Calcium-and salt-stress signaling in plants:shedding light on SOS pathway. Arch Biochem Biophys,2008,471(2):146-158.
[111]Zhu J. K. Cell signaling under salt, water and cold stresses. Curr Opin Plant Biol,2001,4(5):401-406.
[112]Wilson M. P., Majerus P. W. Characterization of a cDNA encoding Arabidopsis thaliana inositol 1,3,4-trisphosphate 5/6-kinase. Biochem Biophys Res Commun,1997,232(3):678-681.
[113]Christmann A., Moes D., Himmelbach A., Yang Y., Tang Y., Grill E. Integration of abscisic acid signalling into plant responses. Plant Biol (Stuttg),2006,8(3):314-325.
[114]Srivastava S., Rahman M. H., Shah S., Kav N. N. Constitutive expression of the pea ABA-responsive 17 (ABR17) cDNA confers multiple stress tolerance in Arabidopsis thaliana. Plant Biotechnol J,2006,4(5): 529-549.
[115]Amitai-Zeigerson H., Scolnik P. A., Bar-Zvi D. Tomato Asrl mRNA and protein are transiently expressed following salt stress, osmotic stress and treatment with abscisic acid. Plant science,1995,110(2): 205-213.
[116]Takeuchi K., Gyohda A., Tominaga M., Kawakatsu M., Hatakeyama A., Ishii N., Shimaya K., Nishimura T., Riemann M., Nick P., Hashimoto M., Komano T., Endo A., Okamoto T., Jikumaru Y., Kamiya Y., Terakawa T., Koshiba T. RSOsPR10 expression in response to environmental stresses is regulated antagonistically by jasmonate/ethylene and salicylic acid signaling pathways in rice roots. Plant Cell Physiol,2011,52(9):1686-1696.
[117]Majeran W., Zybailov B., Ytterberg A. J., Dunsmore J., Sun Q., van Wijk K. J. Consequences of C4 differentiation for chloroplast membrane proteomes in maize mesophyll and bundle sheath cells. Molecular & Cellular Proteomics,2008,7(9):1609-1638.
[118]Zhu J. K. Plant salt tolerance. Trends Plant Sci,2001,6(2):66-71.
[119]Zhu J. K. Regulation of ion homeostasis under salt stress. Curr Opin Plant Biol,2003,6(5):441-445.
[120]Chinnusamy V., Jagendorf A., Zhu J.-K. Understanding and improving salt tolerance in plants. Crop Sci., 2005,45(2):437-448.
[121]Yazaki K. ABC transporters involved in the transport of plant secondary metabolites. FEBS Lett,2006, 580(4):1183-1191.
[122]Lee E. K., Kwon M., Ko J. H., Yi H., Hwang M. G., Chang S., Cho M. H. Binding of sulfonylurea by AtMRP5, an Arabidopsis multidrug resistance-related protein that functions in salt tolerance. Plant Physiol,2004,134(1):528-538.
[123]Arondel V., Kader J. C. Lipid transfer in plants. Experientia,1990,46(6):579-585.
[124]Meijer E. A., de Vries S. C., Sterk P., Gadella D. W., Jr., Wirtz K. W., Hendriks T. Characterization of the non-specific lipid transfer protein EP2 from carrot(Daucus carota L.). Mol Cell Biochem,1993, 123(1-2):159-166.
[125]Faurobert M., Mihr C, Bertin N., Pawlowski T., Negroni L., Sommerer N., Causse M. Major proteome variations associated with cherry tomato pericarp development and ripening. Plant Physiol,2007,143(3): 1327-1346.
[126]Rostovtseva T. K., Bezrukov S. M. VDAC regulation:role of cytosolic proteins and mitochondrial lipids. J Bioenerg Biomembr,2008,40(3):163-170.
[127]Rostovtseva T. K., Sheldon K. L., Hassanzadeh E., Monge C., Saks V., Bezrukov S. M., Sackett D. L. Tubulin binding blocks mitochondrial voltage-dependent anion channel and regulates respiration. Proc Natl Acad Sci U S A,2008,105(48):18746-18751.
[128]Yuasa K., Maeshima M. Purification, properties, and molecular cloning of a novel Ca2+ -binding protein in radish vacuoles. Plant Physiol,2000,124(3):1069-1078.
[129]Bariola P. A., Retelska D., Stasiak A., Kammerer R. A., Fleming A., Hijri M., Frank S.; Fanner E. E. Remorins form a novel family of coiled coil-forming oligomeric and filamentous proteins associated with apical, vascular and embryonic tissues in plants. Plant Mol Biol,2004,55(4):579-594.
[130]Vierling E. The roles of heat shock proteins in plants. Annual Review of Plant Physiology and Plant Molecular Biology,1991,42(1):579-620.
[13 l]Apse M. P., Blumwald E. Na+ transport in plants. FEBS Lett,2007,581(12):2247-2254.
[132]Cho S. H., Hoang Q. T, Kim Y. Y., Shin H. Y., Ok S. H., Bae J. M., Shin J. S. Proteome analysis of gametophores identified a metallothionein involved in various abiotic stress responses in Physcomitrella patens. Plant Cell Rep,2006,25(5):475-488.
[133]Gorg A., Weiss W., Dunn M. J. Current two-dimensional electrophoresis technology for proteomics. Proteomics,2004,4(12):3665-3685.
[134]Wang X., Li X., Li Y. A modified coomassie brilliant blue staining method at nanogram sensitivity compatible with proteomic analysis. Biotechnol Lett,2007,29(10):1599-1603.
[135]Barbier-Brygoo H., Joyard J. Focus on plant proteomics. Plant Physiol Biochem,2004,42(12):913-917.
[136]Fu C., Hu J., Liu T., Ago T., Sadoshima J., Li H. Quantitative analysis of redox-sensitive proteome with DIGE and ICAT. J Proteome Res,2008,7(9):3789-3802.
[137]Zhu M., Dai S., McClung S., Yan X., Chen S. Functional differentiation of Brassica napus guard cells and mesophyll cells revealed by comparative proteomics. Mol Cell Proteomics,2009,8(4):752-766.
[138]Ross P. L., Huang Y. N., Marchese J. N., Williamson B., Parker K., Hattan S., Khainovski N., Pillai S., Dey S., Daniels S., Purkayastha S., Juhasz P., Martin S., Bartlet-Jones M., He F., Jacobson A., Pappin D. J. Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Molecular & Cellular Proteomics,2004,3(12):1154-1169.
[139]Baginsky S., Gruissem W. Chloroplast proteomics:potentials and challenges. Journal of Experimental Botany,2004,55(400):1213-1220.
[140]Klaas J. v. W. Proteomics of the chloroplast:experimentation and prediction. Trends in Plant Science,2000, 5(10):420-425.
[141]Dario L. Chloroplast research in the genomic age. Trends in Genetics,2003,19(1):47-56.
[142]Ferro M., Salvi D., Brugiere S., Miras S., Kowalski S., Louwagie M., Garin J., Joyard J., Rolland N. Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. Molecular & Cellular Proteomics,2003,2(5):325-345.
[143]Ferro M., Salvi D., Riviere-Rolland H., Vermat T., Seigneurin-Berny D., Grunwald D., Garin J., Joyard J., Rolland N. Integral membrane proteins of the chloroplast envelope:Identification and subcellular localization of new transporters. Proceedings of the National Academy of Sciences,2002,99(17): 11487-11492.
[144]Ciambella C., Roepstorff P., Aro E. M., Zolla L. A proteomic approach for investigation of photosynthetic apparatus in plants. Proteomics,2005,5(3):746-757.
[145]Kieselbach T., Schroder W. The proteome of the chloroplast lumen of higher plants. Photosynthesis Research,2003,78(3):249-264.
[146]Schubert M., Petersson U. A., Haas B. J., Funk C., Schroder W. P., Kieselbach T. Proteome map of the chloroplast lumen of Arabidopsis thaliana. Journal of Biological Chemistry,2002,277(10):8354-8365.
[147]Kleffmann T., von Zychlinski A., Russenberger D., Hirsch-Hoffmann M., Gehrig P., Gruissem W., Baginsky S. Proteome dynamics during plastid differentiation in rice. Plant Physiology,2007,143(2):912-923.
[148]Lonosky P. M., Zhang X., Honavar V. G., Dobbs D. L., Fu A., Rodermel S. R. A proteomic analysis of maize chloroplast biogenesis. Plant Physiology,2004,134(2):560-574.
[149]Phee B.-K., Cho J.-H., Park S., Jung J. H., Lee Y.-H., Jeon J.-S., Bhoo S. H., Hahn T.-R. Proteomic analysis of the response of Arabidopsis chloroplast proteins to high light stress. Proteomics,2004,4(11): 3560-3568.
[150]Ahsan N., Nanjo Y., Sawada H., Kohno Y., Komatsu S. Ozone stress-induced proteomic changes in leaf total soluble and chloroplast proteins of soybean reveal that carbon allocation is involved in adaptation in the early developmental stage. Proteomics,2010,10(14):2605-2619.
[151]Majeran W., Cai Y., Sun Q., van Wijk K. J. Functional differentiation of bundle sheath and mesophyll maize chloroplasts determined by comparative proteomics. The Plant Cell Online,2005,17(11):3111-3140.
[152]Schneider T., Schellenberg M., Meyer S., Keller F., Gehrig P., Riedel K., Lee Y., Eberl L., Martinoia E. Quantitative detection of changes in the leaf-mesophyll tonoplast proteome in dependency of a cadmium exposure of barley (Hordeum vulgare L.) plants. Proteomics,2009,9(10):2668-2677.
[153]Alvarez S., Berla B. M., Sheffield J., Cahoon R. E., Jez J. M., Hicks L. M. Comprehensive analysis of the Brassica juncea root proteome in response to cadmium exposure by complementary proteomic approaches. Proteomics,2009,9(9):2419-2431.
[154]Fukao Y., Ferjani A., Tomioka R., Nagasaki N., Kurata R., Nishimori Y., Fujiwara M., Maeshima M. iTRAQ analysis reveals mechanisms of growth defects due to excess zinc in Arabidopsis. Plant Physiology,2011,155(4):1893-1907.
[155]Lan P., Li W., Wen T.-N., Shiau J.-Y., Wu Y.-C., Lin W., Schmidt W. iTRAQ protein profile analysis of arabidopsis roots reveals new aspects critical for iron homeostasis. Plant Physiology,2011,155(2): 821-834.
[156]Patterson J., Ford K., Cassin A., Natera S., Bacic A. Increased abundance of proteins involved in phytosiderophore production in boron-tolerant barley. Plant Physiology,2007,144(3):1612-1631.
[157]Marsh E., Alvarez S., Hicks L. M., Barbazuk W. B., Qiu W., Kovacs L., Schachtman D. Changes in protein abundance during powdery mildew infection of leaf tissues of Cabernet Sauvignon grapevine (Vitis vinifera L.). Proteomics,2010,10(10):2057-2064.
[158]Lippert D. N., Ralph S. G., Phillips M., White R., Smith D., Hardie D., Gershenzon J., Ritland K., Borchers C. H., Bohlmann J. Quantitative iTRAQ proteome and comparative transcriptome analysis of elicitor-induced Norway spruce (Picea abies) cells reveals elements of calcium signaling in the early conifer defense response. Proteomics,2009,9(2):350-367.
[159]Jones A. M. E., Bennett M. H., Mansfield J. W., Grant M. Analysis of the defence phosphoproteome of Arabidopsis thaliana using differential mass tagging. Proteomics,2006,6(14):4155-4165.
[160]Rutschow H., Ytterberg A. J., Friso G., Nilsson R., van Wijk K. J. Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Plant Physiology,2008, 148(1):156-175.
[161]Han B., Chen S., Dai S., Yang N., Wang T. Isobaric tags for relative and absolute quantification-based comparative proteomics reveals the features of plasma membrane-associated proteomes of pollen grains and pollen tubes from Lilium davidii. Journal of Integrative Plant Biology,2010,52(12):1043-1058.
[162]Zhao Z., Stanley B. A., Zhang W., Assmann S. M. ABA-regulated G protein signaling in Arabidopsis guard cells:a proteomic perspective. Journal of Proteome Research,2010,9(4):1637-1647.
[163]Zhu M., Simons B., Zhu N., Oppenheimer D. G., Chen S. Analysis of abscisic acid responsive proteins in Brassica napus guard cells by multiplexed isobaric tagging. Journal of Proteomics,2010,73(4):790-805.
[164]Rao S. R., Ford K. L., Cassin A. M., Roessner U., Patterson J. H., Bacic A. Proteomic and metabolic profiling of rice suspension culture cells as a model to study abscisic acid signaling response pathways in plants. Journal of Proteome Research,2010,9(12):6623-6634.
[165]Wang Y., Yang C, Liu G., Jiang J. Development of a cDNA microarray to identify gene expression of Puccinellia tenuiflora under saline-alkali stress. Plant Physiol Biochem,2007,45(8):567-576.
[166]Ardie S. W., Liu S., Takano T. Expression of the AKT1-type K+ channel gene from Puccimllia tenuiflora, PutAKT1, enhances salt tolerance in Arabidopsis. Plant Cell Rep,2010,29(8):865-874.
[167]Ardie S. W., Xie L., Takahashi R., Liu S., Takano T. Cloning of a high-affinity K+ transporter gene PutHKT2;1 from Puccnellia tenuiflora and its functional comparison with OsHKT2;1 from rice in yeast and Arabidopsis. J Exp Bot,2009,60(12):3491-3502.
[168]Ardie S., Nishiuchi S., Liu S., Takano T. Ectopic expression of the channel β subunits from Puccinellia tenuiflora (KPutB1) and rice (KOB1) alters K+/Na+ homeostasis of yeast and arabidopsis. Molecular Biotechnology,2011,48(1):76-86.
[169]程玉祥.星星草质膜型Na+/H+逆向转运蛋白基因的克隆和特性分析.植物生理学通讯,2008,44(1)：59-64.
[170]Zhang C. Q., Nishiuchi S., Liu S. K., Takano T. Characterization of two plasma membrane protein 3 genes (PutPMP3) from the alkali grass, Puccinellia tenuiflora, and functional comparison of the rice homologues, OsLti6a/b from rice. BMB Rep,2008,41(6):448-454.
[171]Liu H., Zhang X., Takano T., Liu S. Characterization of a PutCAX1 gene from Puccinellia tenuiflora that confers Ca2+ and Ba2+ tolerance in yeast. Biochem Biophys Res Commun,2009,383(4):392-396.
[172]Yang Y. M., Xu C. N., Wang B. M., Jia J. Z., Effects of plant growth regulators on secondary wall thickening of cotton fibres. Plant Growth Regulation,2001,35(3):233-237.
[173]Stewart R. R. C., Bewley J. D. Lipid peroxidation associated with accelerated aging of soybean axes. Plant physiology,1980,65(2):245-248.
[174]Marion M B.A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry,1976,72(1-2):248-254.
[175]Ni R. J., Shen Z., Yang C. P., Wu Y. D., Bi Y. D., Wang B. C. Identification of low abundance polyA-binding proteins in Arabidopsis chloroplast using polyA-affinity column. Mol Biol Rep,2010, 37(2):637-641.
[176]石德成,殷立娟.盐(NaC1)与碱(Na2CO3)对星星草胁迫作用的差异Journal of Integrative Plant Biology, 1993,2:144-149.
[177]尹尚军 石颜.碱胁迫下星星草的主要胁变反应.草业学报,2003,12(4)：51-57.
[178]Manivannan P., Jaleel C. A., Sankar B., Kishorekumar A., Murali P. V., Somasundaram R., Panneerselvam R. Mineral uptake and biochemical changes in Helianthus annuus under treatment with different sodium salts. Colloids and Surfaces B:Biointerfaces,2008,62(1):58-63.
[179]张丽平,王秀峰,史庆华,高青海,刘泽洲.黄瓜幼苗列氯化钠和碳酸氢钠胁迫的生理响应差异.应用生态学报,2008,19(8)：1854-1859.
[180]Yamane K., Kawasaki M., Taniguchi M., Miyake H. Differential effect of NaCl and polyethylene glycol on the ultrastructure of chloroplasts in rice seedlings. J Plant Physiol,2003,160(5):573-575.
[181]Barhoumi Z., Djebali W., Chaibi W., Abdelly C., Smaoui A. Salt impact on photosynthesis and leaf ultrastructure of Aeluropus littoralis. J Plant Res,2007,120(4):529-537.
[182]Austin J. R.,2nd, Frost E., Vidi P. A., Kessler F., Staehelin L. A. Plastoglobules are lipoprotein subcompartments of the chloroplast that are permanently coupled to thylakoid membranes and contain biosynthetic enzymes. Plant Cell,2006,18(7):1693-1703.
[183]Sallas L., Luomala E.-M., Utriainen J., Kainulainen P., Holopainen J. K. Contrasting effects of elevated carbon dioxide concentration and temperature on Rubisco activity, chlorophyll fluorescence, needle ultrastructure and secondary metabolites in conifer seedlings. Tree Physiol,2003,23(2):97-108.
[184]Wilson K. A., McManus M. T., Gordon M. E., Jordan T. W. The proteomics of senescence in leaves of white clover, Trifolium repens L., Proteomics,2002,2(9):1114-1122.
[185]Wang X., Chen S., Zhang H., Shi L., Cao F., Guo L., Xie Y., Wang T., Yan X., Dai S. Desiccation tolerance mechanism in resurrection fern-ally Selaginella tamariscina revealed by physiological and proteomic analysis. J Proteome Res,2010,9(12):6561-6577.
[186]Takahashi S., Murata N. How do environmental stresses accelerate photoinhibition? Trends Plant Sci,2008, 13(4):178-182.
[187]Cambrolle J., Redondo-Gomez S., Mateos-Naranjo E., Luque T., Figueroa M. E. Physiological responses to salinity in the yellow-horned poppy, Glaucium flavum. Plant Physiol Biochem,2011,49(2):186-194.
[188]Cornah J. E., Terry M. J., Smith A. G. Green or red:what stops the traffic in the tetrapyrrole pathway? Trends Plant Sci,2003,8(5):224-230.
[189]Rockholm D. C., Yamamoto H. Y. Violaxanthin de-epoxidase. Plant Physiol,1996,110(2):697-703.
[190]Qiu N., Lu Q., Lu C. Photosynthesis, photosystem Ⅱ efficiency and the xanthophyll cycle in the salt-adapted halophyte Atriplex centralasiatica. New Phytologist,2003,159(2):479-486.
[191]Li X. P., Bjorkman O., Shih C., Grossman A. R., Rosenquist M., Jansson S., Niyogi K. K. A pigment-binding protein essential for regulation of photosynthetic light harvesting. Nature,2000, 403(6768):391-395.
[192]Li X. P., Muller-Moule P., Gilmore A. M., Niyogi K. K. PsbS-dependent enhancement of feedback de-excitation protects photosystem Ⅱ from photoinhibition. Proc Natl Acad Sci U S A,2002,99(23): 15222-15227.
[193]Komenda J., Tichy M., Eichacker L. A. The PsbH protein is associated with the inner antenna CP47 and facilitates Dl processing and incorporation into PSH in the cyanobacterium Synechocystis PCC 6803. Plant Cell Physiol,2005,46(9):1477-1483.
[194]Nixon P. J., Michoux F., Yu J., Boehm M, Komenda J. Recent advances in understanding the assembly and repair of photosystem Ⅱ. Ann Bot,2010,106(1):1-16.
[195]Andaluz S., Lopez-Millan A. F., De las Rivas J., Aro E. M., Abadia J., Abadia A. Proteomic profiles of thylakoid membranes and changes in response to iron deficiency. Photosynth Res,2006,89(2-3): 141-155.
[196]Aro E.M., Suorsa M., Rokka A., Allahverdiyeva Y., Paakkarinen V., Saleem A., Battchikova N., Rintamaki E. Dynamics of photosystem II:a proteomic approach to thylakoid protein complexes. Journal of Experimental Botany,2005,56(411):347-356.
[197]Granlund I., Hall M., Kieselbach T., Schroder W. P. Light induced changes in protein expression and uniform regulation of transcription in the thylakoid lumen of Arubidopsis thaliana. PLoS One,2009,4(5): e5649.
[198]Goulas E., Schubert M., Kieselbach T., Kleczkowski L. A., Gardestrom P., Schroder W., Huny V. The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show differential sensitivity to short-and long-term exposure to low temperature. Plant J,2006,47(5):720-734.
[199]Fagioni M, D'Amici G. M., Timperio A. M., Zolla L. Proteomic analysis of multiprotein complexes in the thylakoid membrane upon cadmium treatment. J Proteome Res,2009,8(1):310-326.
[200]Kapazoglou A., Mould R. M., Gray J. C. Assembly of the Rieske iron-sulphur protein into the cytochrome bf complex in thylakoid membranes of isolated pea chloroplasts. European Journal of Biochemistry, 2000,267(2):352-360.
[201]Kurisu G.,Zhang H., Smith J. L., Cramer W. A. Structure of the cytochrome b6f complex of oxygenic photosynthesis:tuning the cavity. Science,2003,302(5647):1009-1014.
[202]Pineda M., Sajnani C., Baron M. Changes induced by the Pepper mild mottle tobamovirus on the chloroplast proteome of Nicotiana benthamiana. Photosynth Res,2010,103(1):31-45.
[203]Moradi F., Ismail A. M. Responses of photosynthesis, chlorophyll fuorescence and ROS-scavenging systems to salt stress during seedling and reproductive stages in rice. Ann Bot,2007,99(6):1161-1173.
[204]DeglTnnocenti E., Hafsi C., Guidi L., Navari-Izzo F. The effect of salinity on photosynthetic activity in potassium-deficient barley species. J Plant Physiol,2009,166(18):1968-1981.
[205]Zhang J., Jia W., Yang J., Ismail A. M. Role of ABA in integrating plant responses to drought and salt stresses. Field Crops Research,2006,97(1):111-119.
[206]Munns R., Tester M. Mechanisms of salinity tolerance. Annu Rev Plant Biol.2008,59:651-681.
[207]Fricke W., Akhiyarova G., Veselov D., Kudoyarova G. Rapid and tissue-specific changes in ABA and in growth rate in response to salinity in barley leaves. J Exp Bot,2004,55(399):1115-1123.
[208]Fricke W., Akhiyarova G., Wei W., Alexandersson E., Miller A.. Kjellbom P. O., Richardson A., Wojciechowski T., Schreiber L., Veselov D., Kudoyarova G., Volkov V. The short-term growth response to salt of the developing barley leaf. J Exp Bot,2006,57(5):1079-1095.
[209]Asada K. Production and scavenging of reactive oxygen species in chloroplasts and their functions. Plant Physiology,2006,141(2):391-396.
[210]Niyogi K. K. Photoprotection revisited:genetic and molecular approaches. Annu Rev Plant Physiol Plant MolBiol,1999,50:333-359.
[211]Sato N., Terasawa K., Miyajima K., Kabeya Y., Organization, developmental dynamics, and evolution of plastid nucleoids. International Review of Cytology,2003,232:217-262.
[212]Abdallah F., Salamini F., Leister D. A prediction of the size and evolutionary origin of the proteome of chloropiasts of Arabidopsis. Trends Plant Sci,2000,5(4):141-142.
[213]Jansen R. K., Cai Z., Raubeson L. A., Daniell H., Depamphilis C. W., Leebens-Mack J., Muller K. F., Guisinger-Bellian M., Haberle R. C., Hansen A. K., Chumley T. W., Lee S. B., Peery R., McNeal J. R., Kuehl J. V., Boore J. L. Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns. Proc Natl Acad Sci U S A,2007,104(49): 19369-19374.
[214]Haward S. R., Napter J. A., Gray J. C. Chloroplast SecA functions as a membrane-associated component of the See-like protein translocase of pea chloroplasts. European Journal of Biochemistry,1997,248(3): 724-730.
[215]Schuenemann D., Amin P., Hartmann E., Hoffman N. E. Chloroplast SecY is complexed to SecE and involved in the translocation of the 33-kDa but not the 23-kDa subunit of the oxygen-evolving complex. Journal of Biological Chemistry,1999,274(17):12177-12182.
[2]Chinnusamy V., Zhu J., Zhu J. K. Salt stress signaling and mechanisms of plant salt tolerance. Genet Eng (N Y),2006,27:141-177.
[3]Mahajan S., Tuteja N. Cold, salinity and drought stresses:an overview. Arch Biochem Biophys,2005,444(2): 139-158.
[4]Tuteja N. Mechanisms of high salinity tolerance in plants. Methods Enzymol,2007,428:419-438.
[5]Parida A. K., Das A. B. Salt tolerance and salinity effects on plants:a review. Ecotoxicol Environ Saf,2005, 60(3):324-349.
[6]Walia H., Wilson C., Condamine P., Liu X., Ismail A. M., Zeng L., Wanamaker S. I., Mandal J., Xu J., Cui X., Close T. J. Comparative transcriptional profiling of two contrasting rice genotypes under salinity stress during the vegetative growth stage. Plant Physiol,2005,139(2):822-835.
[7]Kawasaki S., Borchert C., Deyholos M., Wang H., Brazille S., Kawai K., Galbraith D., Bohnert H. J. Gene expression profiles during the initial phase of salt stress in rice. Plant Cell,2001,13(4):889-905.
[8]Chao D. Y., Luo Y. H., Shi M., Luo D., Lin H. X. Salt-responsive genes in rice revealed by cDNA microarray analysis. Cell Res,2005,15(10):796-810.
[9]Gu R., Fonseca S., Puskas L. G., Hackler L., Jr., Zvara A., Dudits D., Pais M. S. Transcript identification and profiling during salt stress and recovery of Populus euphratica. Tree Physiol,2004,24(3):265-276.
[10]Jiang Y., Deyholos M. K. Comprehensive transcriptional profiling of NaCl-stressed Arabidopsis roots reveals novel classes of responsive genes. BMC Plant Biol,2006,6:25.
[11]Wang Z.L., Li P.H., Fredricksen M., Gong Z.Z., Kim C. S., Zhang C., Bohnert H. J., Zhu J.K., Bressan R. A., Hasegawa P. M., Zhao Y.X., Zhang H. Expressed sequence tags from Thellungiella halophila, a new model to study plant salt-tolerance. Plant science,2004,166(3):609-616.
[12]Taji T., Seki M., Satou M., Sakurai T., Kobayashi M., Ishiyama K., Narusaka Y., Narusaka M., Zhu J. K., Shinozaki K. Comparative genomics in salt tolerance between Arabidopsis and arabidopsis-related halophyte salt cress using Arabidopsis microarray. Plant Physiol,2004,135(3):1697-1709.
[13]Wang Y., Chu Y., Liu G., Wang M. H., Jiang J., Hou Y., Qu G., Yang C. Identification of expressed sequence tags in an alkali grass (Puccinellia tenuiflora) cDNA library. J Plant Physiol,2007,164(1):78-89.
[14]Kore-eda S., Cushman M. A., Akselrod I., Bufford D., Fredrickson M., Clark E., Cushman J. C. Transcript profiling of salinity stress responses by large-scale expressed sequence tag analysis in Mesembryanthemum crystallinum. Gene,2004,341:83-92.
[15]Munns R. Genes and salt tolerance:bringing them together. New Phytol,2005,167(3):645-663.
[16]Flowers T. J., Colmer T. D. Salinity tolerance in halophytes. New Phytol,2008,179(4):945-963.
[17]Horie T., Yoshida K., Nakayama H., Yamada K., Oiki S., Shinmyo A. Two types of HKT transporters with different properties of Na+ and K+ transport in Oryza sativa. Plant J,2001,27(2):129-138.
[18]Gaxiola R. A., Rao R., Sherman A., Grisafi P., Alper S. L., Fink G. R. The Arabidopsis thaliana proton transporters, AtNhx 1 and Avpl, can function in cation detoxification in yeast. Proc Natl Acad Sci U S A, 1999,96(4):1480-1485.
[19]Apse M. P., Aharon G. S., Snedden W. A., Blumwald E. Salt tolerance conferred by overexpression of a vacuolar Na+/H+ antiport in Arabidopsis. Science,1999,285(5431):1256-1258.
[20]Verbruggen N., Villarroel R., Van Montagu M. Osmoregulation of a pyrroline-5-carboxylate reductase gene in Arabidopsis thaliana. Plant Physiol,1993,103(3):771-781.
[21]Miller G., Suzuki N., Ciftci-Yilmaz S., Mittler R. Reactive oxygen species homeostasis and signalling during drought and salinity stresses. Plant Cell Environ,2010,33(4):453-467.
[22]Zhu J. K. Salt and drought stress signal transduction in plants. Annu Rev Plant Biol,2002,53:247-273.
[23]Hu H., Dai M., Yao J., Xiao B., Li X., Zhang Q., Xiong L. Overexpressing a NAM, ATAF, and CUC (NAC) transcription factor enhances drought resistance and salt tolerance in rice. Proc Natl Acad Sci U S A, 2006,103(35):12987-12992.
[24]Chen S., Harmon A. C. Advances in plant proteomics. Proteomics,2006,6(20):5504-5516.
[25]Pang Q., Chen S., Dai S., Chen Y., Wang Y., Yan X. Comparative proteomics of salt tolerance in Arabidopsis thaliana and Thellungiella halophila. J Proteome Res,2010,9(5):2584-2599.
[26]Ndimba B. K., Chivasa S., Simon W. J., Slabas A. R. Identification of Arabidopsis salt and osmotic stress responsive proteins using two-dimensional difference gel electrophoresis and mass spectrometry. Proteomics,2005,5(16):4185-4196.
[27]Lee S., Lee E. J., Yang E. J., Lee J. E., Park A. R., Song W. H., Park O. K. Proteomic identification of annexins, calcium-dependent membrane binding proteins that mediate osmotic stress and abscisic acid signal transduction in Arabidopsis. Plant Cell,2004,16(6):1378-1391.
[28]Kim Y. O., Pan S., Jung C. H., Kang H. A zinc finger-containing glycine-rich RNA-binding protein, a/RZ-la, has a negative impact on seed germination and seedling growth of Arabidopsis thaliana under salt or drought stress conditions. Plant Cell Physiol,2007,48(8):1170-1181.
[29]Jiang Y., Yang B., Harris N. S., Deyholos M. K. Comparative proteomic analysis of NaCl stress-responsive proteins in Arabidopsis roots. J Exp Bot,2007,58(13):3591-3607.
[30]Zhang L., Tian L. H., Zhao J. F., Song Y., Zhang C. J., Guo Y. Identification of an apoplastic protein involved in the initial phase of salt stress response in rice root by two-dimensional electrophoresis. Plant Physiol, 2009,149(2):916-928.
[31]Yan S., Tang Z., Su W., Sun W. Proteomic analysis of salt stress-responsive proteins in rice root. Proteomics, 2005,5(1):235-244.
[32]Wen F.P., Zhang Z.H., Bai T., Xu Q., Pan Y.H. Proteomics reveals the effects of gibberellic acid (GA3) on salt-stressed rice (Oryza sativa L.) shoots. Plant science,2010,178(2):170-175.
[33]Salehdeh G. H., Siopomgcp J., Wade L. J., Ghareyazie B., Bennett J. A proteomic approach to analyzing drought-and salt-responsiveness in rice. Field Crops Research,2002,76:21.
[34]Ruan S. L., Ma H. S., Wang S. H., Fu Y. P., Xin Y., Liu W. Z., Wang F., Tong J. X., Wang S. Z., Chen H. Z. Proteomic identification of OsCYP2, a rice cyclophilin that confers salt tolerance in rice(Oiyza sativa L.) seedlings when overexpressed. BMC Plant Biol,2011,11:34.
[35]Parker R., Flowers T. J., Moore A. L., Harpham N. V. An accurate and reproducible method for proteome profiling of the effects of salt stress in the rice leaf lamina. J Exp Bot,2006,57(5):1109-1118.
[36]Nohzadeh Malakshah S., Habibi Rezaei M., Heidari M., Salekdeh G. H. Proteomics reveals new salt responsive proteins associated with rice plasma membrane. Biosci Biotechnol Biochem,2007,71(9): 2144-2154.
[37]Li X. J., Yang M. F., Chen H., Qu L. Q., Chen F., Shen S. H. Abscisic acid pretreatment enhances salt tolerance of rice seedlings:Proteomic evidence. Biochim Biophys Acta,2010.
[38]Kim D. W., Rakwal R., Agrawal G. K., Jung Y. H., Shibato J., Jwa N. S., Iwahashi Y., Iwahashi H., Kim D. H., Shim Ie S., Usui K. A hydroponic rice seedling culture model system for investigating proteome of salt stress in rice leaf. Electrophoresis,2005,26(23):4521-4539.
[39]Dooki A. D., Mayer-Posner F. J., Askari H., Zaiee A. A., Salekdeh G. H. Proteomic responses of rice young panicles to salinity. Proteomics,2006,6(24):6498-6507.
[40]Chitteti B. R., Peng Z. Proteome and phosphoproteome differential expression under salinity stress in rice (Oryza saliva) roots. J Proteome Res,2007,6(5):1718-1727.
[41]Cheng Y, Qi Y., Zhu Q., Chen X, Wang N., Zhao X., Chen H., Cui X., Xu L., Zhang W. New changes in the plasma-membrane-associated proteome of rice roots under salt stress. Proteomics,2009,9(11): 3100-3114.
[42]Abbasi F. M., Komatsu S. A proteomic approach to analyze salt-responsive proteins in rice leaf sheath. Proteomics,2004,4(7):2072-2081.
[43]Wang M. C, Peng Z. Y., Li C. L., Li F., Liu C, Xia G. M. Proteomic analysis on a high salt tolerance introgression strain of Triticum aestivun/Thinopyrum ponticum. Proteomics,2008,8(7):1470-1489.
[44]Peng Z., Wang M., Li F., Lv H., Li C., Xia G. A proteomic study of the response to salinity and drought stress in an introgression strain of bread wheat. Mol Cell Proteomics,2009,8(12):2676-2686.
[45]Jacoby R. P., Millar A. H., Taylor N. L. Wheat mitochondrial proteomes provide new links between antioxidant defense and plant salinity tolerance. J Proteome Res,2010,9(12):6595-6604.
[46]Huo C. M., Zhao B. C., Ge R. C., Shen Y. Z., Huang Z. J. Proteomic analysis of the salt tolerance mutant of wheat under salt stress. Yi Chuan Xue Bao,2004,31(12):1408-1414.
[47]Caruso G., Cavaliere C., Guarino C., Gubbiotti R., Foglia P., Lagana A. Identification of changes in Triticum durum L. leaf proteome in response to salt stress by two-dimensional electrophoresis and MALDI-TOF mass spectrometry. Anal Bioanal Chem,2008,391(1):381-390.
[48]Witzel K., Weidner A., Surabhi G. K., Varshney R. K., Kunze G., Buck-Sorlin G. H., Bomer A., Mock H. P. Comparative analysis of the grain proteome fraction in barley genotypes with contrasting salinity tolerance during germination. Plant Cell Environ,2010,33(2):211-222.
[49]Witzel K., Weidner A., Surabhi G. K., Borner A., Mock H. P. Salt stress-induced alterations in the root proteome of barley genotypes with contrasting response towards salinity. J Exp Bot,2009,60(12): 3545-3557.
[50]Sugimoto M., Takeda K. Proteomic analysis of specific proteins in the root of salt-tolerant barley. Biosci Biotechnol Biochem,2009,73(12):2762-2765.
[51]Rasoulnia A., Bihamta M. R., Peyghambari S. A., Alizadeh H., Rahnama A. Proteomic response of barley leaves to salinity. Mol Biol Rep,2011,38(8):5055-5063.
[52]Zorb C., Schmitt S., Neeb A., Karl S., Linder M., Schubert S. The biochemical reaction of maize (Zea mays L.) to salt stress is characterized by a mitigation of symptoms and not by a specific adaptation. Plant science, 2004,167(1):91-100.
[53]Zorb C., Schmitt S., Muhling K. H. Proteomic changes in maize roots after short-term adjustment to saline growth conditions. Proteomics,2010,10(24):4441-4449.
[54]Zorb C., Herbst R., Forreiter C., Schubert S. Short-term effects of salt exposure on the maize chloroplast protein pattern. Proteomics,2009,9(17):4209-4220.
[55]Veeranagamallaiah G., Jyothsnakumari G., Thippeswamy M., Chandra Obul Reddy P., Surabhi G.-K., Sriranganayakulu G., Mahesh Y., Rajasekhar B., Madhurarekha C., Sudhakar C. Proteomic analysis of salt stress responses in foxtail millet (Setaria italica L. cv. Prasad) seedling. Plant science,2008,175(5): 631-641.
[56]Kumar Swami A., Alam S. I., Sengupta N., Sarin R. Differential proteomic analysis of salt stress response in Sorghum bicolor leaves. Environmental and Experimental Botany,2011,71(2):321-328.
[57]Xu C., Sibicky T., Huang B. Protein profile analysis of salt-responsive proteins in leaves and roots in two cultivars of creeping bentgrass differing in salinity tolerance. Plant Cell Rep,2010,29(6):595-615.
[58]Bandehagh A., Salekdeh G. H., Toorchi M., Mohammadi A., Komatsu S. Comparative proteomic analysis of canola leaves under salinity stress. Proteomics,2011,11(10):1965-1975.
[59]Jain S., Srivastava S., Sarin N. B., Kav N. N. Proteomics reveals elevated levels of PR 10 proteins in saline-tolerant peanut (Arachis hypogaea) calli. Plant Physiol Biochem,2006,44(4):253-259.
[60]Sobhanian H., Razavizadeh R., Nanjo Y., Ehsanpour A. A., Jazii F. R., Motamed N., Komatsu S. Proteome analysis of soybean leaves, hypocotyls and roots under salt stress. Proteome Sci,2010,8:19.
[61]Aghaei K., Ehsanpour A. A., Shah A. H., Komatsu S. Proteome analysis of soybean hypocotyl and root under salt stress. Amino Acids,2009,36(1):91-98.
[62]Nat N. V. K., Sanjeeva S., Laksiri G., Stanford F. B. Proteome-level changes in the roots of Pisum sativum in response to salinity. Annals of Applied Biology,2004,145(2):217-230.
[63]Keeler M., Letarte J., Hattrup E., Hickman F., Haynes P. A. Two-dimensional differential in-gel electrophoresis (DIGE) of leaf and roots of Lycopersicon esculentum. Methods Mol Biol,2007,355: 157-174.
[64]Manaa A., Ben Ahmed H., Vaiot B., Bouchet J. P., Aschi-Smiti S., Causse M., Faurobert M. Salt and genotype impact on plant physiology and root proteome variations in tomato. J Exp Bot,2011,62(8): 2797-2813.
[65]Chen S., Gollop N., Heuer B. Proteomic analysis of salt-stressed tomato (Solanum lycopersicum) seedlings: effect of genotype and exogenous application of glycinebetaine. J Exp Bot,2009,60(7):2005-2019.
[66]Aghaei K., Ehsanpour A. A., Komatsu S. Proteome analysis of potato under salt stress. J Proteome Res,2008, 7(11):4858-4868.
[67]Vincent D., Ergul A., Bohlman M. C., Tattersall E. A., Tillett R. L., Wheatley M. D., Woolsey R., Quilici D. R., Joets J., Schlauch K., Schooley D. A., Cushman J. C., Cramer G. R. Proteomic analysis reveals differences between Vitis vinifera L. cv. Chardonnay and cv. Cabernet Sauvignon and their responses to water deficit and salinity. J Exp Bot,2007,58(7):1873-1892.
[68]Jellouli N., Ben Jouira H., Skouri H., Ghorbel A., Gourgouri A., Mliki A. Proteomic analysis of Tunisian grapevine cultivar Razegui under salt stress. J Plant Physiol,2008,165(5):471-481.
[69]Razavizadeh R., Ehsanpour A. A., Ahsan N., Komatsu S. Proteome analysis of tobacco leaves under salt stress. Peptides,2009,30(9):1651-1659.
[70]Dani V., Simon W. J., Duranti M., Croy R. R. Changes in the tobacco leaf apoplast proteome in response to salt stress. Proteomics,2005,5(3):737-745.
[71]Du C. X., Fan H. F., Guo S. R., Tezuka T., Li J. Proteomic analysis of cucumber seedling roots subjected to salt stress. Phytochemistry,2010,71(13):1450-1459.
[72]Wakeel A., Asif A. R., Pitann B., Schubert S. Proteome analysis of sugar beet (Beta vulgaris L.) elucidates constitutive adaptation during the first phase of salt stress. J Plant Physiol,2011,168(6):519-526.
[73]Tanou G., Job C, Rajjou L., Arc E., Belghazi M., Diamantidis G., Molassiotis A., Job D. Proteomics reveals the overlapping roles of hydrogen peroxide and nitric oxide in the acclimation of citrus plants to salinity. Plant J,2009,60(5):795-804.
[74]Chattopadhyay A., Subba P., Pandey A., Bhushan D., Kumar R., Datta A., Chakraborty S., Chakraborty N. Analysis of the grasspea proteome and identification of stress-responsive proteins upon exposure to high salinity, low temperature, and abscisic acid treatment. Phytochemistry,2011,72(10):1293-1307.
[75]Tada Y., Kashimura T. Proteomic analysis of salt-responsive proteins in the mangrove plant, Bruguiera gymnorhiza. Plant Cell Physiol,2009,50(3):439-446.
[76]Chen F., Zhang S., Jiang H., Ma W., Korpelainen H., Li C. Comparative proteomics analysis of salt response reveals sex-related photosynthetic inhibition by salinity in Populns cathayana cuttings. J Proteome Res, 2011,10(9):3944-3958.
[77]Geissler N., Hussin S., Koyro H. W. Elevated atmospheric CO2 concentration enhances salinity tolerance in Aster tripolium L. Planta,2010,231(3):583-594.
[78]Barkla B. J., Vera-Estrella R., Hernandez-Coronado M., Pantoja O. Quantitative proteomics of the tonoplast reveals a role for glycolytic enzymes in salt tolerance. Plant Cell,2009,21(12):4044-4058.
[79]Sobhanian H., Motamed N., Jazii F. R., Nakamura T., Komatsu S. Salt stress induced differential proteome and metabolome response in the shoots of Aeluropus lagopoides (Poaceae), a halophyte C4 plant. J Proteome Res,2010,9(6):2882-2897.
[80]Askari H., Edqvist J., Hajheidari M., Kafi M., Salekdeh G. H. Effects of salinity levels on proteome of Suaeda aegyptiaca leaves. Proteomics,2006,6(8):2542-2554.
[81]Li W., Zhang C., Lu Q., Wen X., Lu C. The combined effect of salt stress and heat shock on proteome profiting in Suaeda salsa. J Plant Physiol,2011,168(15):1743-1752.
[82]Yu J., Chen S., Zhao Q., Wang T., Yang C., Diaz C., Sun G., Dai S. Physiological and proteomic analysis of salinity tolerance in Puccinellia tenuiflora. J Proteome Res,2011,10(9):3852-3870.
[83]Wang X., Li X., Deng X., Han H., Shi W., Li Y. A protein extraction method compatible with proteomic analysis for the euhalophyte Salicornia europaea. Electrophoresis,2007,28(21):3976-3987.
[84]Wang X., Fan P., Song H., Chen X., Li X., Li Y. Comparative proteomic analysis of differentially expressed proteins in shoots of Salicornia europaea under different salinity. J Proteome Res,2009,8(7): 3331-3345.
[85]Fan P., Feng J., Jiang P., Chen X., Bao H., Nie L., Jiang D., Lv S., Kuang T., Li Y. Coordination of carbon fixation and nitrogen metabolism in Salicornia europaea under salinity:Comparative proteomic analysis on chloroplast proteins. Proteomics,2011,11(22):4346-4367.
[86]Sengupta S., Majumder A. L. Insight into the salt tolerance factors of a wild halophytic rice, Porteresia coarctata:a physiological and proteomic approach. Planta,2009,229(4):911-929.
[87]Wang X., Yang P., Gao Q., Liu X., Kuang T., Shen S., He Y. Proteomic analysis of the response to high-salinity stress in Physcomitrellapatens. Planta,2008,228(1):167-177.
[88]Liska A. J., Shevchenko A., Pick U., Katz A. Enhanced photosynthesis and redox energy production contribute to salinity tolerance in Dunaliella as revealed by homology-based proteomics. Plant Physiol, 2004,136(1):2806-2817.
[89]Katz A., Waridel P., Shevchenko A., Pick U. Salt-induced changes in the plasma membrane proteome of the halotolerant alga Dunaliella salina as revealed by blue native gel electrophoresis and nano-LC-MS/MS analysis. Mol Cell Proteomics,2007,6(9):1459-1472.
[90]Zhang H., Han B., Wang T., Chen S., Li H., Zhang Y., Dai S. Mechanisms of plant salt response:insights from proteomics. J Proteome Res,2012,11(1):49-67.
[91]Enami I., Tohri A., Kamo M., Ohta H., Shen J.-R. Identification of domains on the 43 kDa chlorophyll-carrying protein (CP43) that are shielded from tryptic attack by binding of the extrinsic 33 kDa protein with Photosystem Ⅱ complex. Biochimica et Biophysica Acta (BBA)-Bioenergetics,1997, 1320(1):17-26.
[92]Sirpio S., Allahverdiyeva Y., Suorsa M., Paakkarinen V., Vainonen J., Battchikova N., Aro E. M. TLP18.3, a novel thylakoid lumen protein regulating photosystem Ⅱ repair cycle. Biochem J,2007,406(3):415-425.
[93]Hippler M., Ratajczak R., Haehnel W. Identification of the plastocyanin binding subunit of photosystem 1. FEBS Letters,1989,250(2):280-284.
[94]Rodoni S., Vicentini F., Schellenberg M., Matile P., Hortensteiner S. Partial purification and characterization of red chlorophyll catabolite reductase, a stroma protein involved in chlorophyll breakdown. Plant Physiol,1997,115(2):677-682.
[95]Takamiya K. I., Tsuchiya T., Ohta H. Degradation pathway(s) of chlorophyll:what has gene cloning revealed? Trends Plant Sci,2000,5(10):426-431.
[96]Pruzinska A., Anders I., Aubry S., Schenk N., Tapernoux-Luthi E., Muller T., Krautler B., Hortensteiner S. In vivo participation of red chlorophyll catabolite reductase in chlorophyll breakdown. Plant Cell,2007, 19(1):369-387.
[97]Mittler R., Vanderauwera S., Gollery M., Van Breusegem F. Reactive oxygen gene network of plants. Trends Plant Sci,2004,9(10):490-498.
[98]Jithesh M. N., Prashanth S. R., Sivaprakash K. R., Parida A. K. Antioxidative response mechanisms in halophytes:their role in stress defence. J Genet,2006,85(3):237-254.
[99]Zhang H. X., Hodson J. N., Williams J. P., Blumwald E. Engineering salt-tolerant Brassica plants: characterization of yield and seed oil quality in transgenic plants with increased vacuolar sodium accumulation. Proc Natl Acad Sci U S A,2001,98(22):12832-12836.
[100]Gould S. J., Valle D. Peroxisome biogenesis disorders:genetics and cell biology. Trends Genet,2000,16(8): 340-345.
[101]Nito K., Kamigaki A., Kondo M., Hayashi M., Nishimura M. Functional classification of Arabidopsis peroxisome biogenesis factors proposed from analyses of knockdown mutants. Plant Cell Physiol,2007, 48(6):763-774.
[102]Horling F., Lamkemeyer P., Konig J., Finkemeier I., Kandlbinder A., Baier M., Dietz K. J. Divergent light-, ascorbate-, and oxidative stress-dependent regulation of expression of the peroxiredoxin gene family in Arabidopsis. Plant Physiol,2003,131(1):317-325.
[103]Dietz K. J. Peroxiredoxins in plants and cyanobacteria. Antioxid Redox Signal,2011,15(4):1129-1159.
[104]Yoshimura K.., Miyao K., Gaber A., Takeda T., Kanaboshi H., Miyasaka H., Shigeoka S. Enhancement of stress tolerance in transgenic tobacco plants overexpressing Chlamydomonas glutathione peroxidase in chloroplasts or cytosol. Plant J,2004,37(1):21-33.
[105]Dixon D. P., Lapthorn A., Edwards R. Plant glutathione transferases. Genome Biol,2002,3(3): REVIEWS3004.
[106]Lane B. G., Dunwell J. M., Ray J. A., Schmitt M. R., Cuming A. C. Germin, a protein marker of early plant development, is an oxalate oxidase. J Biol Chem,1993,268(17):12239-12242.
[107]Woo E. J., Dunwell J. M., Goodenough P. W., Marvier A. C., Pickersgill R. W. Germin is a manganese containing homohexamer with oxalate oxidase and superoxide dismutase activities. Nat Struct Biol,2000, 7(11):1036-1040.
[108]Cao Y. R., Chen S. Y., Zhang J. S. Ethylene signaling regulates salt stress response:An overview. Plant Signal Behav,2008,3(10):761-763.
[109]Darwish E., Testerink C., Khalil M., El-Shihy O., Munnik T. Phospholipid signaling responses in salt-stressed rice leaves. Plant Cell Physiol,2009,50(5):986-997.
[110]Mahajan S., Pandey G. K., Tuteja N. Calcium-and salt-stress signaling in plants:shedding light on SOS pathway. Arch Biochem Biophys,2008,471(2):146-158.
[111]Zhu J. K. Cell signaling under salt, water and cold stresses. Curr Opin Plant Biol,2001,4(5):401-406.
[112]Wilson M. P., Majerus P. W. Characterization of a cDNA encoding Arabidopsis thaliana inositol 1,3,4-trisphosphate 5/6-kinase. Biochem Biophys Res Commun,1997,232(3):678-681.
[113]Christmann A., Moes D., Himmelbach A., Yang Y., Tang Y., Grill E. Integration of abscisic acid signalling into plant responses. Plant Biol (Stuttg),2006,8(3):314-325.
[114]Srivastava S., Rahman M. H., Shah S., Kav N. N. Constitutive expression of the pea ABA-responsive 17 (ABR17) cDNA confers multiple stress tolerance in Arabidopsis thaliana. Plant Biotechnol J,2006,4(5): 529-549.
[115]Amitai-Zeigerson H., Scolnik P. A., Bar-Zvi D. Tomato Asrl mRNA and protein are transiently expressed following salt stress, osmotic stress and treatment with abscisic acid. Plant science,1995,110(2): 205-213.
[116]Takeuchi K., Gyohda A., Tominaga M., Kawakatsu M., Hatakeyama A., Ishii N., Shimaya K., Nishimura T., Riemann M., Nick P., Hashimoto M., Komano T., Endo A., Okamoto T., Jikumaru Y., Kamiya Y., Terakawa T., Koshiba T. RSOsPR10 expression in response to environmental stresses is regulated antagonistically by jasmonate/ethylene and salicylic acid signaling pathways in rice roots. Plant Cell Physiol,2011,52(9):1686-1696.
[117]Majeran W., Zybailov B., Ytterberg A. J., Dunsmore J., Sun Q., van Wijk K. J. Consequences of C4 differentiation for chloroplast membrane proteomes in maize mesophyll and bundle sheath cells. Molecular & Cellular Proteomics,2008,7(9):1609-1638.
[118]Zhu J. K. Plant salt tolerance. Trends Plant Sci,2001,6(2):66-71.
[119]Zhu J. K. Regulation of ion homeostasis under salt stress. Curr Opin Plant Biol,2003,6(5):441-445.
[120]Chinnusamy V., Jagendorf A., Zhu J.-K. Understanding and improving salt tolerance in plants. Crop Sci., 2005,45(2):437-448.
[121]Yazaki K. ABC transporters involved in the transport of plant secondary metabolites. FEBS Lett,2006, 580(4):1183-1191.
[122]Lee E. K., Kwon M., Ko J. H., Yi H., Hwang M. G., Chang S., Cho M. H. Binding of sulfonylurea by AtMRP5, an Arabidopsis multidrug resistance-related protein that functions in salt tolerance. Plant Physiol,2004,134(1):528-538.
[123]Arondel V., Kader J. C. Lipid transfer in plants. Experientia,1990,46(6):579-585.
[124]Meijer E. A., de Vries S. C., Sterk P., Gadella D. W., Jr., Wirtz K. W., Hendriks T. Characterization of the non-specific lipid transfer protein EP2 from carrot(Daucus carota L.). Mol Cell Biochem,1993, 123(1-2):159-166.
[125]Faurobert M., Mihr C, Bertin N., Pawlowski T., Negroni L., Sommerer N., Causse M. Major proteome variations associated with cherry tomato pericarp development and ripening. Plant Physiol,2007,143(3): 1327-1346.
[126]Rostovtseva T. K., Bezrukov S. M. VDAC regulation:role of cytosolic proteins and mitochondrial lipids. J Bioenerg Biomembr,2008,40(3):163-170.
[127]Rostovtseva T. K., Sheldon K. L., Hassanzadeh E., Monge C., Saks V., Bezrukov S. M., Sackett D. L. Tubulin binding blocks mitochondrial voltage-dependent anion channel and regulates respiration. Proc Natl Acad Sci U S A,2008,105(48):18746-18751.
[128]Yuasa K., Maeshima M. Purification, properties, and molecular cloning of a novel Ca2+ -binding protein in radish vacuoles. Plant Physiol,2000,124(3):1069-1078.
[129]Bariola P. A., Retelska D., Stasiak A., Kammerer R. A., Fleming A., Hijri M., Frank S.; Fanner E. E. Remorins form a novel family of coiled coil-forming oligomeric and filamentous proteins associated with apical, vascular and embryonic tissues in plants. Plant Mol Biol,2004,55(4):579-594.
[130]Vierling E. The roles of heat shock proteins in plants. Annual Review of Plant Physiology and Plant Molecular Biology,1991,42(1):579-620.
[13 l]Apse M. P., Blumwald E. Na+ transport in plants. FEBS Lett,2007,581(12):2247-2254.
[132]Cho S. H., Hoang Q. T, Kim Y. Y., Shin H. Y., Ok S. H., Bae J. M., Shin J. S. Proteome analysis of gametophores identified a metallothionein involved in various abiotic stress responses in Physcomitrella patens. Plant Cell Rep,2006,25(5):475-488.
[133]Gorg A., Weiss W., Dunn M. J. Current two-dimensional electrophoresis technology for proteomics. Proteomics,2004,4(12):3665-3685.
[134]Wang X., Li X., Li Y. A modified coomassie brilliant blue staining method at nanogram sensitivity compatible with proteomic analysis. Biotechnol Lett,2007,29(10):1599-1603.
[135]Barbier-Brygoo H., Joyard J. Focus on plant proteomics. Plant Physiol Biochem,2004,42(12):913-917.
[136]Fu C., Hu J., Liu T., Ago T., Sadoshima J., Li H. Quantitative analysis of redox-sensitive proteome with DIGE and ICAT. J Proteome Res,2008,7(9):3789-3802.
[137]Zhu M., Dai S., McClung S., Yan X., Chen S. Functional differentiation of Brassica napus guard cells and mesophyll cells revealed by comparative proteomics. Mol Cell Proteomics,2009,8(4):752-766.
[138]Ross P. L., Huang Y. N., Marchese J. N., Williamson B., Parker K., Hattan S., Khainovski N., Pillai S., Dey S., Daniels S., Purkayastha S., Juhasz P., Martin S., Bartlet-Jones M., He F., Jacobson A., Pappin D. J. Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Molecular & Cellular Proteomics,2004,3(12):1154-1169.
[139]Baginsky S., Gruissem W. Chloroplast proteomics:potentials and challenges. Journal of Experimental Botany,2004,55(400):1213-1220.
[140]Klaas J. v. W. Proteomics of the chloroplast:experimentation and prediction. Trends in Plant Science,2000, 5(10):420-425.
[141]Dario L. Chloroplast research in the genomic age. Trends in Genetics,2003,19(1):47-56.
[142]Ferro M., Salvi D., Brugiere S., Miras S., Kowalski S., Louwagie M., Garin J., Joyard J., Rolland N. Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. Molecular & Cellular Proteomics,2003,2(5):325-345.
[143]Ferro M., Salvi D., Riviere-Rolland H., Vermat T., Seigneurin-Berny D., Grunwald D., Garin J., Joyard J., Rolland N. Integral membrane proteins of the chloroplast envelope:Identification and subcellular localization of new transporters. Proceedings of the National Academy of Sciences,2002,99(17): 11487-11492.
[144]Ciambella C., Roepstorff P., Aro E. M., Zolla L. A proteomic approach for investigation of photosynthetic apparatus in plants. Proteomics,2005,5(3):746-757.
[145]Kieselbach T., Schroder W. The proteome of the chloroplast lumen of higher plants. Photosynthesis Research,2003,78(3):249-264.
[146]Schubert M., Petersson U. A., Haas B. J., Funk C., Schroder W. P., Kieselbach T. Proteome map of the chloroplast lumen of Arabidopsis thaliana. Journal of Biological Chemistry,2002,277(10):8354-8365.
[147]Kleffmann T., von Zychlinski A., Russenberger D., Hirsch-Hoffmann M., Gehrig P., Gruissem W., Baginsky S. Proteome dynamics during plastid differentiation in rice. Plant Physiology,2007,143(2):912-923.
[148]Lonosky P. M., Zhang X., Honavar V. G., Dobbs D. L., Fu A., Rodermel S. R. A proteomic analysis of maize chloroplast biogenesis. Plant Physiology,2004,134(2):560-574.
[149]Phee B.-K., Cho J.-H., Park S., Jung J. H., Lee Y.-H., Jeon J.-S., Bhoo S. H., Hahn T.-R. Proteomic analysis of the response of Arabidopsis chloroplast proteins to high light stress. Proteomics,2004,4(11): 3560-3568.
[150]Ahsan N., Nanjo Y., Sawada H., Kohno Y., Komatsu S. Ozone stress-induced proteomic changes in leaf total soluble and chloroplast proteins of soybean reveal that carbon allocation is involved in adaptation in the early developmental stage. Proteomics,2010,10(14):2605-2619.
[151]Majeran W., Cai Y., Sun Q., van Wijk K. J. Functional differentiation of bundle sheath and mesophyll maize chloroplasts determined by comparative proteomics. The Plant Cell Online,2005,17(11):3111-3140.
[152]Schneider T., Schellenberg M., Meyer S., Keller F., Gehrig P., Riedel K., Lee Y., Eberl L., Martinoia E. Quantitative detection of changes in the leaf-mesophyll tonoplast proteome in dependency of a cadmium exposure of barley (Hordeum vulgare L.) plants. Proteomics,2009,9(10):2668-2677.
[153]Alvarez S., Berla B. M., Sheffield J., Cahoon R. E., Jez J. M., Hicks L. M. Comprehensive analysis of the Brassica juncea root proteome in response to cadmium exposure by complementary proteomic approaches. Proteomics,2009,9(9):2419-2431.
[154]Fukao Y., Ferjani A., Tomioka R., Nagasaki N., Kurata R., Nishimori Y., Fujiwara M., Maeshima M. iTRAQ analysis reveals mechanisms of growth defects due to excess zinc in Arabidopsis. Plant Physiology,2011,155(4):1893-1907.
[155]Lan P., Li W., Wen T.-N., Shiau J.-Y., Wu Y.-C., Lin W., Schmidt W. iTRAQ protein profile analysis of arabidopsis roots reveals new aspects critical for iron homeostasis. Plant Physiology,2011,155(2): 821-834.
[156]Patterson J., Ford K., Cassin A., Natera S., Bacic A. Increased abundance of proteins involved in phytosiderophore production in boron-tolerant barley. Plant Physiology,2007,144(3):1612-1631.
[157]Marsh E., Alvarez S., Hicks L. M., Barbazuk W. B., Qiu W., Kovacs L., Schachtman D. Changes in protein abundance during powdery mildew infection of leaf tissues of Cabernet Sauvignon grapevine (Vitis vinifera L.). Proteomics,2010,10(10):2057-2064.
[158]Lippert D. N., Ralph S. G., Phillips M., White R., Smith D., Hardie D., Gershenzon J., Ritland K., Borchers C. H., Bohlmann J. Quantitative iTRAQ proteome and comparative transcriptome analysis of elicitor-induced Norway spruce (Picea abies) cells reveals elements of calcium signaling in the early conifer defense response. Proteomics,2009,9(2):350-367.
[159]Jones A. M. E., Bennett M. H., Mansfield J. W., Grant M. Analysis of the defence phosphoproteome of Arabidopsis thaliana using differential mass tagging. Proteomics,2006,6(14):4155-4165.
[160]Rutschow H., Ytterberg A. J., Friso G., Nilsson R., van Wijk K. J. Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Plant Physiology,2008, 148(1):156-175.
[161]Han B., Chen S., Dai S., Yang N., Wang T. Isobaric tags for relative and absolute quantification-based comparative proteomics reveals the features of plasma membrane-associated proteomes of pollen grains and pollen tubes from Lilium davidii. Journal of Integrative Plant Biology,2010,52(12):1043-1058.
[162]Zhao Z., Stanley B. A., Zhang W., Assmann S. M. ABA-regulated G protein signaling in Arabidopsis guard cells:a proteomic perspective. Journal of Proteome Research,2010,9(4):1637-1647.
[163]Zhu M., Simons B., Zhu N., Oppenheimer D. G., Chen S. Analysis of abscisic acid responsive proteins in Brassica napus guard cells by multiplexed isobaric tagging. Journal of Proteomics,2010,73(4):790-805.
[164]Rao S. R., Ford K. L., Cassin A. M., Roessner U., Patterson J. H., Bacic A. Proteomic and metabolic profiling of rice suspension culture cells as a model to study abscisic acid signaling response pathways in plants. Journal of Proteome Research,2010,9(12):6623-6634.
[165]Wang Y., Yang C, Liu G., Jiang J. Development of a cDNA microarray to identify gene expression of Puccinellia tenuiflora under saline-alkali stress. Plant Physiol Biochem,2007,45(8):567-576.
[166]Ardie S. W., Liu S., Takano T. Expression of the AKT1-type K+ channel gene from Puccimllia tenuiflora, PutAKT1, enhances salt tolerance in Arabidopsis. Plant Cell Rep,2010,29(8):865-874.
[167]Ardie S. W., Xie L., Takahashi R., Liu S., Takano T. Cloning of a high-affinity K+ transporter gene PutHKT2;1 from Puccnellia tenuiflora and its functional comparison with OsHKT2;1 from rice in yeast and Arabidopsis. J Exp Bot,2009,60(12):3491-3502.
[168]Ardie S., Nishiuchi S., Liu S., Takano T. Ectopic expression of the channel β subunits from Puccinellia tenuiflora (KPutB1) and rice (KOB1) alters K+/Na+ homeostasis of yeast and arabidopsis. Molecular Biotechnology,2011,48(1):76-86.
[169]程玉祥.星星草质膜型Na+/H+逆向转运蛋白基因的克隆和特性分析.植物生理学通讯,2008,44(1)：59-64.
[170]Zhang C. Q., Nishiuchi S., Liu S. K., Takano T. Characterization of two plasma membrane protein 3 genes (PutPMP3) from the alkali grass, Puccinellia tenuiflora, and functional comparison of the rice homologues, OsLti6a/b from rice. BMB Rep,2008,41(6):448-454.
[171]Liu H., Zhang X., Takano T., Liu S. Characterization of a PutCAX1 gene from Puccinellia tenuiflora that confers Ca2+ and Ba2+ tolerance in yeast. Biochem Biophys Res Commun,2009,383(4):392-396.
[172]Yang Y. M., Xu C. N., Wang B. M., Jia J. Z., Effects of plant growth regulators on secondary wall thickening of cotton fibres. Plant Growth Regulation,2001,35(3):233-237.
[173]Stewart R. R. C., Bewley J. D. Lipid peroxidation associated with accelerated aging of soybean axes. Plant physiology,1980,65(2):245-248.
[174]Marion M B.A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry,1976,72(1-2):248-254.
[175]Ni R. J., Shen Z., Yang C. P., Wu Y. D., Bi Y. D., Wang B. C. Identification of low abundance polyA-binding proteins in Arabidopsis chloroplast using polyA-affinity column. Mol Biol Rep,2010, 37(2):637-641.
[176]石德成,殷立娟.盐(NaC1)与碱(Na2CO3)对星星草胁迫作用的差异Journal of Integrative Plant Biology, 1993,2:144-149.
[177]尹尚军 石颜.碱胁迫下星星草的主要胁变反应.草业学报,2003,12(4)：51-57.
[178]Manivannan P., Jaleel C. A., Sankar B., Kishorekumar A., Murali P. V., Somasundaram R., Panneerselvam R. Mineral uptake and biochemical changes in Helianthus annuus under treatment with different sodium salts. Colloids and Surfaces B:Biointerfaces,2008,62(1):58-63.
[179]张丽平,王秀峰,史庆华,高青海,刘泽洲.黄瓜幼苗列氯化钠和碳酸氢钠胁迫的生理响应差异.应用生态学报,2008,19(8)：1854-1859.
[180]Yamane K., Kawasaki M., Taniguchi M., Miyake H. Differential effect of NaCl and polyethylene glycol on the ultrastructure of chloroplasts in rice seedlings. J Plant Physiol,2003,160(5):573-575.
[181]Barhoumi Z., Djebali W., Chaibi W., Abdelly C., Smaoui A. Salt impact on photosynthesis and leaf ultrastructure of Aeluropus littoralis. J Plant Res,2007,120(4):529-537.
[182]Austin J. R.,2nd, Frost E., Vidi P. A., Kessler F., Staehelin L. A. Plastoglobules are lipoprotein subcompartments of the chloroplast that are permanently coupled to thylakoid membranes and contain biosynthetic enzymes. Plant Cell,2006,18(7):1693-1703.
[183]Sallas L., Luomala E.-M., Utriainen J., Kainulainen P., Holopainen J. K. Contrasting effects of elevated carbon dioxide concentration and temperature on Rubisco activity, chlorophyll fluorescence, needle ultrastructure and secondary metabolites in conifer seedlings. Tree Physiol,2003,23(2):97-108.
[184]Wilson K. A., McManus M. T., Gordon M. E., Jordan T. W. The proteomics of senescence in leaves of white clover, Trifolium repens L., Proteomics,2002,2(9):1114-1122.
[185]Wang X., Chen S., Zhang H., Shi L., Cao F., Guo L., Xie Y., Wang T., Yan X., Dai S. Desiccation tolerance mechanism in resurrection fern-ally Selaginella tamariscina revealed by physiological and proteomic analysis. J Proteome Res,2010,9(12):6561-6577.
[186]Takahashi S., Murata N. How do environmental stresses accelerate photoinhibition? Trends Plant Sci,2008, 13(4):178-182.
[187]Cambrolle J., Redondo-Gomez S., Mateos-Naranjo E., Luque T., Figueroa M. E. Physiological responses to salinity in the yellow-horned poppy, Glaucium flavum. Plant Physiol Biochem,2011,49(2):186-194.
[188]Cornah J. E., Terry M. J., Smith A. G. Green or red:what stops the traffic in the tetrapyrrole pathway? Trends Plant Sci,2003,8(5):224-230.
[189]Rockholm D. C., Yamamoto H. Y. Violaxanthin de-epoxidase. Plant Physiol,1996,110(2):697-703.
[190]Qiu N., Lu Q., Lu C. Photosynthesis, photosystem Ⅱ efficiency and the xanthophyll cycle in the salt-adapted halophyte Atriplex centralasiatica. New Phytologist,2003,159(2):479-486.
[191]Li X. P., Bjorkman O., Shih C., Grossman A. R., Rosenquist M., Jansson S., Niyogi K. K. A pigment-binding protein essential for regulation of photosynthetic light harvesting. Nature,2000, 403(6768):391-395.
[192]Li X. P., Muller-Moule P., Gilmore A. M., Niyogi K. K. PsbS-dependent enhancement of feedback de-excitation protects photosystem Ⅱ from photoinhibition. Proc Natl Acad Sci U S A,2002,99(23): 15222-15227.
[193]Komenda J., Tichy M., Eichacker L. A. The PsbH protein is associated with the inner antenna CP47 and facilitates Dl processing and incorporation into PSH in the cyanobacterium Synechocystis PCC 6803. Plant Cell Physiol,2005,46(9):1477-1483.
[194]Nixon P. J., Michoux F., Yu J., Boehm M, Komenda J. Recent advances in understanding the assembly and repair of photosystem Ⅱ. Ann Bot,2010,106(1):1-16.
[195]Andaluz S., Lopez-Millan A. F., De las Rivas J., Aro E. M., Abadia J., Abadia A. Proteomic profiles of thylakoid membranes and changes in response to iron deficiency. Photosynth Res,2006,89(2-3): 141-155.
[196]Aro E.M., Suorsa M., Rokka A., Allahverdiyeva Y., Paakkarinen V., Saleem A., Battchikova N., Rintamaki E. Dynamics of photosystem II:a proteomic approach to thylakoid protein complexes. Journal of Experimental Botany,2005,56(411):347-356.
[197]Granlund I., Hall M., Kieselbach T., Schroder W. P. Light induced changes in protein expression and uniform regulation of transcription in the thylakoid lumen of Arubidopsis thaliana. PLoS One,2009,4(5): e5649.
[198]Goulas E., Schubert M., Kieselbach T., Kleczkowski L. A., Gardestrom P., Schroder W., Huny V. The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show differential sensitivity to short-and long-term exposure to low temperature. Plant J,2006,47(5):720-734.
[199]Fagioni M, D'Amici G. M., Timperio A. M., Zolla L. Proteomic analysis of multiprotein complexes in the thylakoid membrane upon cadmium treatment. J Proteome Res,2009,8(1):310-326.
[200]Kapazoglou A., Mould R. M., Gray J. C. Assembly of the Rieske iron-sulphur protein into the cytochrome bf complex in thylakoid membranes of isolated pea chloroplasts. European Journal of Biochemistry, 2000,267(2):352-360.
[201]Kurisu G.,Zhang H., Smith J. L., Cramer W. A. Structure of the cytochrome b6f complex of oxygenic photosynthesis:tuning the cavity. Science,2003,302(5647):1009-1014.
[202]Pineda M., Sajnani C., Baron M. Changes induced by the Pepper mild mottle tobamovirus on the chloroplast proteome of Nicotiana benthamiana. Photosynth Res,2010,103(1):31-45.
[203]Moradi F., Ismail A. M. Responses of photosynthesis, chlorophyll fuorescence and ROS-scavenging systems to salt stress during seedling and reproductive stages in rice. Ann Bot,2007,99(6):1161-1173.
[204]DeglTnnocenti E., Hafsi C., Guidi L., Navari-Izzo F. The effect of salinity on photosynthetic activity in potassium-deficient barley species. J Plant Physiol,2009,166(18):1968-1981.
[205]Zhang J., Jia W., Yang J., Ismail A. M. Role of ABA in integrating plant responses to drought and salt stresses. Field Crops Research,2006,97(1):111-119.
[206]Munns R., Tester M. Mechanisms of salinity tolerance. Annu Rev Plant Biol.2008,59:651-681.
[207]Fricke W., Akhiyarova G., Veselov D., Kudoyarova G. Rapid and tissue-specific changes in ABA and in growth rate in response to salinity in barley leaves. J Exp Bot,2004,55(399):1115-1123.
[208]Fricke W., Akhiyarova G., Wei W., Alexandersson E., Miller A.. Kjellbom P. O., Richardson A., Wojciechowski T., Schreiber L., Veselov D., Kudoyarova G., Volkov V. The short-term growth response to salt of the developing barley leaf. J Exp Bot,2006,57(5):1079-1095.
[209]Asada K. Production and scavenging of reactive oxygen species in chloroplasts and their functions. Plant Physiology,2006,141(2):391-396.
[210]Niyogi K. K. Photoprotection revisited:genetic and molecular approaches. Annu Rev Plant Physiol Plant MolBiol,1999,50:333-359.
[211]Sato N., Terasawa K., Miyajima K., Kabeya Y., Organization, developmental dynamics, and evolution of plastid nucleoids. International Review of Cytology,2003,232:217-262.
[212]Abdallah F., Salamini F., Leister D. A prediction of the size and evolutionary origin of the proteome of chloropiasts of Arabidopsis. Trends Plant Sci,2000,5(4):141-142.
[213]Jansen R. K., Cai Z., Raubeson L. A., Daniell H., Depamphilis C. W., Leebens-Mack J., Muller K. F., Guisinger-Bellian M., Haberle R. C., Hansen A. K., Chumley T. W., Lee S. B., Peery R., McNeal J. R., Kuehl J. V., Boore J. L. Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns. Proc Natl Acad Sci U S A,2007,104(49): 19369-19374.
[214]Haward S. R., Napter J. A., Gray J. C. Chloroplast SecA functions as a membrane-associated component of the See-like protein translocase of pea chloroplasts. European Journal of Biochemistry,1997,248(3): 724-730.
[215]Schuenemann D., Amin P., Hartmann E., Hoffman N. E. Chloroplast SecY is complexed to SecE and involved in the translocation of the 33-kDa but not the 23-kDa subunit of the oxygen-evolving complex. Journal of Biological Chemistry,1999,274(17):12177-12182.