用户名: 密码: 验证码:
A novel dominant glossy mutation causes suppression of wax biosynthesis pathway and deficiency of cuticular wax in Brassica napus
详细信息    查看全文
  • 作者:Yuanyuan Pu (6)
    Jie Gao (6)
    Yanli Guo (6)
    Tingting Liu (6)
    Lixia Zhu (6)
    Ping Xu (6)
    Bin Yi (6)
    Jing Wen (6)
    Jinxing Tu (6)
    Chaozhi Ma (6)
    Tingdong Fu (6)
    Jitao Zou (7)
    Jinxiong Shen (6)
  • 关键词:Brassica napus ; Glossy mutant ; Genetic mapping ; Wax biosynthesis ; Microarray assays ; Candidate genes
  • 刊名:BMC Plant Biology
  • 出版年:2013
  • 出版时间:December 2013
  • 年:2013
  • 卷:13
  • 期:1
  • 全文大小:1,041 KB
  • 参考文献:1. Jetter R, Kunst L, Samuels AL: Composition of plant cuticular waxes. In / Biology of the plant cuticle. Edited by: Riederer M, M眉ller C. Oxford: Blackwell; 2006:145鈥?81. CrossRef
    2. Bernard A, Joubes J: Arabidopsis cuticular waxes: advances in synthesis, export and regulation. / Prog Lipid Res 2013,52(1):110鈥?29. CrossRef
    3. Eigenbrode SD, Espelie KE: Effects of plant epicuticular lipids on insect herbivores. / Annu Rev Entomol 1995, 40:171鈥?94. CrossRef
    4. Li-Beisson Y, Shorrosh B, Beisson F, Andersson MX, Arondel V, Bates PD, Baud S, Bird D, Debono A, Durrett TP, / et al.: Acyl-lipid metabolism. In / The Arabidopsis book. Rockville MD: American Society of Plant Biologists; 2010:8-e0133.
    5. Kosma DK, Bourdenx B, Bernard A, Parsons EP, Lu S, Joubes J, Jenks MA: The impact of water deficiency on leaf cuticle lipids of Arabidopsis . / Plant Physiol 2009,151(4):1918鈥?929. CrossRef
    6. Shepherd T, Wynne Griffiths D: The effects of stress on plant cuticular waxes. / New Phytol 2006,171(3):469鈥?99. CrossRef
    7. Seo PJ, Lee SB, Suh MC, Park MJ, Go YS, Park CM: The MYB96 transcription factor regulates cuticular wax biosynthesis under drought conditions in Arabidopsis . / Plant Cell 2011,23(3):1138鈥?152. CrossRef
    8. Chen X: Cloning and characterization of the WAX2 gene of Arabidopsis involved in cuticle membrane and wax production. / Plant Cell Online 2003,15(5):1170鈥?185. CrossRef
    9. L眉 S, Song T, Kosma DK, Parsons EP, Rowland O, Jenks MA: Arabidopsis CER8 encodes LONG-CHAIN ACYL-COA SYNTHETASE 1 ( LACS1 ) that has overlapping functions with LACS2 in plant wax and cutin synthesis. / Plant J 2009,59(4):553鈥?64. CrossRef
    10. Weng H, Molina I, Shockey J, Browse J: Organ fusion and defective cuticle function in a lacs1 lacs2 double mutant of Arabidopsis . / Planta 2010,231(5):1089鈥?100. CrossRef
    11. Islam MA, Du H, Ning J, Ye H, Xiong L: Characterization of Glossy1- homologous genes in rice involved in leaf wax accumulation and drought resistance. / Plant Mol Biol 2009,70(4):443鈥?56. CrossRef
    12. Yu D, Ranathunge K, Huang H, Pei Z, Franke R, Schreiber L, He C: Wax Crystal-Sparse Leaf1 encodes a beta-ketoacyl CoA synthase involved in biosynthesis of cuticular waxes on rice leaf. / Planta 2008,228(4):675鈥?85. CrossRef
    13. Saladi茅 M, Matas AJ, Isaacson T, Jenks MA, Goodwin SM, Niklas KJ, Xiaolin R, Labavitch JM, Shackel KA, Fernie AR, / et al.: A reevaluation of the key factors that influence tomato fruit softening and integrity. / Plant Physiol 2007,144(2):1012鈥?028. CrossRef
    14. Leide J, Hildebrandt U, Reussing K, Riederer M, Vogg G: The developmental pattern of tomato fruit wax accumulation and its impact on cuticular transpiration barrier properties: effects of a deficiency in a beta-ketoacyl-coenzyme A synthase ( LeCER6 ). / Plant Physiol 2007,144(3):1667鈥?679. CrossRef
    15. Kurata T, Kawabata-Awai C, Sakuradani E, Shimizu S, Okada K, Wada T: The YORE-YORE gene regulates multiple aspects of epidermal cell differentiation in Arabidopsis . / Plant J 2003,36(1):55鈥?6. CrossRef
    16. Fiebig A, Mayfield JA, Miley NL, Chau S, Fischer RL, Preuss D: Alterations in CER6 , a gene identical to CUT1 , differentially affect long-chain lipid content on the surface of pollen and stems. / Plant Cell 2000,12(10):2001鈥?008.
    17. Rashotte AM, Jenks MA, Nguyen TD, Feldmann KA: Epicuticular wax variation in ecotypes of Arabidopsis thaliana . / Phytochemistry 1997,45(2):251鈥?55. CrossRef
    18. Samuels L, Kunst L, Jetter R: Sealing plant surfaces: cuticular wax formation by epidermal cells. / Annu Rev Plant Biol 2008, 59:683鈥?07. CrossRef
    19. Aarts MG, Keijzer CJ, Stiekema WJ, Pereira A: Molecular characterization of the CER1 gene of Arabidopsis involved in epicuticular wax biosynthesis and pollen fertility. / Plant Cell 1995,7(12):2115鈥?127.
    20. Bourdenx B, Bernard A, Domergue F, Pascal S, Leger A, Roby D, Pervent M, Vile D, Haslam RP, Napier JA, / et al.: Overexpression of Arabidopsis ECERIFERUM1 promotes wax very-long-chain alkane biosynthesis and influences plant response to biotic and abiotic stresses. / Plant Physiol 2011,156(1):29鈥?5. CrossRef
    21. McNevin JP, Woodward W, Hannoufa A, Feldmann KA, Lemieux B: Isolation and characterization of eceriferum ( cer ) mutants induced by T-DNA insertions in Arabidopsis thaliana . / Genome 1993,36(3):610鈥?18. CrossRef
    22. Bernard A, Domergue F, Pascal S, Jetter R, Renne C, Faure JD, Haslam RP, Napier JA, Lessire R, Joubes J: Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex. / Plant Cell 2012,24(7):3106鈥?118. CrossRef
    23. Zhang Z, Wang W, Li W: Genetic interactions underlying the biosynthesis and inhibition of beta-diketones in wheat and their impact on glaucousness and cuticle permeability. / PloS One 2013,8(1):e54129. CrossRef
    24. Adamski NM, Bush MS, Simmonds J, Turner AS, Mugford SG, Jones A, Findlay K, Pedentchouk N, Von Wettstein-Knowles P, Uauy C: The Inhibitor of wax 1 locus ( Iw1 ) prevents formation of beta- and OH-beta-diketones in wheat cuticular waxes and maps to a sub-cM interval on chromosome arm 2BS. / Plant J 2013,74(6):989鈥?002. CrossRef
    25. Ortiz R, Vuylsteke D, Ogburia NM: Inheritance of Pseudostem Waxiness in Banana and Plantain ( Musa spp .). / J Heridity 1995,86(4):297鈥?99.
    26. Kunst L, Samuels AL: Biosynthesis and secretion of plant cuticular wax. / Prog Lipid Res 2003,42(1):51鈥?0. CrossRef
    27. Hannoufa A, McNevin J, Lemieux B: Epicuticular waxes of eceriferum mutants of Arabidopsis thaliana . / Phytochemistry 1993,33(4):851鈥?55. CrossRef
    28. Mo JG, Li WG, Wang JS: Inheritance and agronomic performance of the waxless character in Brassica napus L . / Plant Breed 1992, 108:256鈥?59. CrossRef
    29. Zhou XR, Zhou ZJ, Li SL: Inheritance of waxless character in Rapseed ( B.napus L. ). / Acta Agriculturae Shanghai 1995,11(3):87鈥?9.
    30. Zhang X, Liu ZY, Wang P, Wang QS, Yang S, Feng H: Fine mapping of BrWax1 , a gene controlling cuticular wax biosynthesis in Chinese cabbage ( Brassica rapa L. ssp. pekinensis ). / Mol Breed 2013,32(4):867鈥?74. doi:10.1007/s11032鈥?13鈥?914鈥? CrossRef
    31. Zeng X, Wen J, Wan Z, Yi B, Shen J, Ma C, Tu J, Fu T: Effects of Bleomycin on microspore embryogenesis in Brassica napus and detection of somaclonal variation using AFLP molecular markers. / Plant Cell Tiss Org Cult 2009,101(1):23鈥?9. CrossRef
    32. Li C, Wang A, Ma X, Pourkheirandish M, Sakuma S, Wang N, Ning S, Nevo E, Nawrath C, Komatsuda T, / et al.: An eceriferum locus, cer-zv , is associated with a defect in cutin responsible for water retention in barley ( Hordeum vulgare ) leaves. / Theor Appl Genet 2013,126(3):637鈥?46. CrossRef
    33. Tanaka T, Tanaka H, Machida C, Watanabe M, Machida Y: A new method for rapid visualization of defects in leaf cuticle reveals five intrinsic patterns of surface defects in Arabidopsis . / Plant J 2004,37(1):139鈥?46. CrossRef
    34. Lu S, Zhao H, Parsons EP, Xu C, Kosma DK, Xu X, Chao D, Lohrey G, Bangarusamy DK, Wang G, / et al.: The glossyhead1 allele of ACC1 reveals a principal role for multidomain acetyl-coenzyme A carboxylase in the biosynthesis of cuticular waxes by Arabidopsis . / Plant Physiol 2011,157(3):1079鈥?092. CrossRef
    35. Michelmore RW, Paran I, Kesseli RV: Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. / Proc Natl Acad Sci U S A 1991,88(21):9828鈥?832. CrossRef
    36. Kim H, Choi SR, Bae J, Hong CP, Lee SY, Hossain MJ, Van Nguyen D, Jin M, Park BS, Bang JW, / et al.: Sequenced BAC anchored reference genetic map that reconciles the ten individual chromosomes of Brassica rapa . / BMC Genomics 2009, 10:432. CrossRef
    37. Wang X, Wang H, Wang J, Sun R, Wu J, Liu S, Bai Y, Mun JH, Bancroft I, Cheng F, / et al.: The genome of the mesopolyploid crop species Brassica rapa . / Nat Genet 2011,43(10):1035鈥?039. CrossRef
    38. Wang J, Long Y, Wu B, Liu J, Jiang C, Shi L, Zhao J, King GJ, Meng J: The evolution of Brassica napus FLOWERING LOCUS T paralogues in the context of inverted chromosomal duplication blocks. / BMC Evol Biol 2009, 9:271. CrossRef
    39. Xia S, Cheng L, Zu F, Dun X, Zhou Z, Yi B, Wen J, Ma C, Shen J, Tu J, / et al.: Mapping of BnMs4 and BnRf to a common microsyntenic region of Arabidopsis thaliana chromosome 3 using intron polymorphism markers. / Theor Appl Genet 2012,124(7):1193鈥?200. CrossRef
    40. Wen M, Jetter R: Composition of secondary alcohols, ketones, alkanediols, and ketols in Arabidopsis thaliana cuticular waxes. / J Exp Bot 2009,60(6):1811鈥?821. CrossRef
    41. Greer S, Wen M, Bird D, Wu X, Samuels L, Kunst L, Jetter R: The cytochrome P450 enzyme CYP96A15 is the midchain alkane hydroxylase responsible for formation of secondary alcohols and ketones in stem cuticular wax of Arabidopsis . / Plant Physiol 2007,145(3):653鈥?67. CrossRef
    42. Li F, Wu X, Lam P, Bird D, Zheng H, Samuels L, Jetter R, Kunst L: Identification of the wax ester synthase/acyl-coenzyme A: diacylglycerol acyltransferase WSD1 required for stem wax ester biosynthesis in Arabidopsis . / Plant Physiol 2008,148(1):97鈥?07. CrossRef
    43. Cheng F, Liu S, Wu J, Fang L, Sun S, Liu B, Li P, Hua W, Wang X: BRAD, the genetics and genomics database for Brassica plants. / BMC Plant Biol 2011, 11:136. CrossRef
    44. Cheng F, Wu J, Fang L, Wang X: Syntenic gene analysis between Brassica rapa and other Brassicaceae species. / Front Plant Sci 2012, 3:198. CrossRef
    45. Parkin IA, Gulden SM, Sharpe AG, Lukens L, Trick M, Osborn TC, Lydiate DJ: Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana . / Genetics 2005,171(2):765鈥?81. CrossRef
    46. Zhao J, Huang J, Chen F, Xu F, Ni X, Xu H, Wang Y, Jiang C, Wang H, Xu A, / et al.: Molecular mapping of Arabidopsis thaliana lipid-related orthologous genes in Brassica napus . / Theor Appl Genet 2012,124(2):407鈥?21. CrossRef
    47. Rana D, van den Boogaart T, O鈥橬eill CM, Hynes L, Bent E, Macpherson L, Park JY, Lim YP, Bancroft I: Conservation of the microstructure of genome segments in Brassica napus and its diploid relatives. / Plant J 2004,40(5):725鈥?33. CrossRef
    48. Lagercrantz U, Lydiate DJ: Comparative genome mapping in Brassica . / Genetics 1996,144(4):1903鈥?910.
    49. Lukens L, Zou F, Lydiate D, Parkin I, Osborn T: Comparison of a Brassica oleracea genetic map with the genome of Arabidopsis thaliana . / Genetics 2003,164(1):359鈥?72.
    50. Yi B, Zeng F, Lei S, Chen Y, Yao X, Zhu Y, Wen J, Shen J, Ma C, Tu J, / et al.: Two duplicate CYP704B1 -homologous genes BnMs1 and BnMs2 are required for pollen exine formation and tapetal development in Brassica napus . / Plant J 2010,63(6):925鈥?38. CrossRef
    51. Doyle JJ, Doyle JL: Isolation of plant DNA from fresh tissue. / Focus 1990, 12:13鈥?5.
    52. Chen W, Zhang Y, Liu X, Chen B, Tu J, Tingdong F: Detection of QTL for six yield-related traits in oilseed rape ( Brassica napus ) using DH and immortalized F(2) populations. / Theor Appl Genet 2007,115(6):849鈥?58. CrossRef
    53. Zeng X, Zhu L, Chen Y, Qi L, Pu Y, Wen J, Yi B, Shen J, Ma C, Tu J, / et al.: Identification, fine mapping and characterisation of a dwarf mutant ( bnaC.dwf ) in Brassica napus . / Theor Appl Genet 2011,122(2):421鈥?28. CrossRef
    54. Lincoln S, Daly M, Lander E: / Constructing genetic linkage maps with Mapmaker/exp 3.0: a tutorial and reference manual, 3rd edn. Cambridge, MA: Whitehead Institute,1992,Technical Report; 1992.
    55. Zhu Y, Cao Z, Xu F, Huang Y, Chen M, Guo W, Zhou W, Zhu J, Meng J, Zou J, / et al.: Analysis of gene expression profiles of two near-isogenic lines differing at a QTL region affecting oil content at high temperatures during seed maturation in oilseed rape ( Brassica napus L. ). / Theor Appl Genet 2012,124(3):515鈥?31. CrossRef
    56. Bioconductor http://www.bioconductor.org
    57. Smyth GK: Limma: linear models for microarray data. In / Bioinformatics and Computational Biology Solutions using R and Bioconductor. Edited by: Gentleman R, Carey V, Huber W, Irizarry R. New York: Springer New York; 2005:397鈥?20. CrossRef
    58. Hong F, Breitling R, McEntee CW, Wittner BS, Nemhauser JL, Chory J: RankProd: a bioconductor package for detecting differentially expressed genes in meta-analysis. / Bioinformatics 2006,22(22):2825鈥?827. CrossRef
    59. Tair http://www.arabidopsis.org
    60. Kurdyukov S, Faust A, Nawrath C, Bar S, Voisin D, Efremova N, Franke R, Schreiber L, Saedler H, Metraux JP, / et al.: The epidermis-specific extracellular BODYGUARD controls cuticle development and morphogenesis in Arabidopsis . / Plant Cell 2006,18(2):321鈥?39. CrossRef
    61. Xiao F, Goodwin SM, Xiao Y, Sun Z, Baker D, Tang X, Jenks MA, Zhou JM: Arabidopsis CYP86A2 represses Pseudomonas syringae type III genes and is required for cuticle development. / EMBO J 2004,23(14):2903鈥?913. CrossRef
    62. Kimbara J, Yoshida M, Ito H, Hosoi K, Kusano M, Kobayashi M, Ariizumi T, Asamizu E, Ezura H: A novel class of sticky peel and light green mutations causes cuticle deficiency in leaves and fruits of tomato ( Solanum lycopersicum ). / Planta 2012,236(5):1559鈥?570. CrossRef
  • 作者单位:Yuanyuan Pu (6)
    Jie Gao (6)
    Yanli Guo (6)
    Tingting Liu (6)
    Lixia Zhu (6)
    Ping Xu (6)
    Bin Yi (6)
    Jing Wen (6)
    Jinxing Tu (6)
    Chaozhi Ma (6)
    Tingdong Fu (6)
    Jitao Zou (7)
    Jinxiong Shen (6)

    6. National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
    7. National Research Council Canada, Saskatoon, Saskatchewan S7N 0 W9, Canada
  • ISSN:1471-2229
文摘
Background The aerial parts of land plants are covered with cuticular waxes that limit non-stomatal water loss and gaseous exchange, and protect plants from ultraviolet radiation and pathogen attack. This is the first report on the characterization and genetic mapping of a novel dominant glossy mutant (BnaA.GL) in Brassica napus. Results Transmission electron microscopy revealed that the cuticle ultrastructure of GL mutant leaf and stem were altered dramatically compared with that of wide type (WT). Scanning electron microscopy corroborated the reduction of wax on the leaf and stem surface. A cuticular wax analysis of the GL mutant leaves further confirmed the drastic decrease in the total wax content, and a wax compositional analysis revealed an increase in aldehydes but a severe decrease in alkanes, ketones and secondary alcohols. These results suggested a likely blockage of the decarbonylation step in the wax biosynthesis pathway. Genetic mapping narrowed the location of the BnaA.GL gene to the end of A9 chromosome. A single-nucleotide polymorphism (SNP) chip assay in combination with bulk segregant analysis (BSA) also located SNPs in the same region. Two SNPs, two single sequence repeat (SSR) markers and one IP marker were located on the flanking region of the BnaA.GL gene at a distance of 0.6 cM. A gene homologous to ECERIFERUM1 (CER1) was located in the mapped region. A cDNA microarray chip assay revealed coordinated down regulation of genes encoding enzymes of the cuticular wax biosynthetic pathway in the glossy mutant, with BnCER1 being one of the most severely suppressed genes. Conclusions Our results indicated that surface wax biosynthesis is broadly affected in the glossy mutant due to the suppression of the BnCER1 and other wax-related genes. These findings offer novel clues for elucidating the molecular basis of the glossy phenotype.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700