In this study, deep-water channel strata of the Late Cretaceous Nanaimo Group are examined at Hornby and Denman islands, British Columbia, Canada. Evidence for a long-lived submarine conduit records the history of sediment transfer at multiple temporal and spatial scales. The composite submarine channel system deposit is 19.5 km wide and 1500 m thick, which formed and filled over ~ 15 Ma. Facies scale analyses highlight conglomeratic channel fill juxtaposed against thin-bedded out-of-channel deposits. Erosional surfaces are commonly mantled by mass-transport deposits, which provide evidence for conduit wall reworking and maintenance. At a larger scale, a series of composite, conglomerate-prone channelform bodies are observed to stratigraphically stack in two distinct phases: (1) early persistence of laterally offset (migrated) channels; and (2) later vertically aligned and aggraded channels. This stratigraphic trend is comparable to composite, multi-phase degradational-aggradational submarine channel complexes observed globally. As such, we consider the stratigraphic evolution of the large submarine conduit deposit (1500 m thick) to have formed through the protracted processes of geomorphic channels with subdued paleo-bathymetric relief (20–200 m). Detailed observations at the scale of facies and stratigraphic architecture provide criteria for recognition and interpretation of long-lived slope channel systems, emphasizing a disparate relationship between stratigraphic and geomorphic surfaces.